RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SLC18A1P54219 525 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 CD81P60033 236 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 KIAA0141Q14154 515 aaPredicted RBP8.79□□□□□ -1
HDAC6-233ENST00000489352 VMACQ2NL98 169 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 SLX4IPQ5VYV7 408 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 PLCXD3Q63HM9 321 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 ZNF573Q86YE8 665 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 OFCC1Q8IZS5 231 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 OR8H3Q8N146 312 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 OR52L1Q8NGH7 329 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 OR10A6Q8NH74 314 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 COPS3Q9UNS2 423 aa8.79□□□□□ -1
HDAC6-233ENST00000489352 DYNC1H1Q14204 4646 aaKnown RBP8.79□□□□□ -1
HDAC6-233ENST00000489352 J3QT63 122 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 ZNF593O00488 134 aaPredicted RBP8.78□□□□□ -1
HDAC6-233ENST00000489352 ARPC1BO15143 372 aaKnown RBP8.78□□□□□ -1
HDAC6-233ENST00000489352 NOS1APO75052 506 aaPredicted RBP8.78□□□□□ -1
HDAC6-233ENST00000489352 HSPB1P04792 205 aaKnown RBP8.78□□□□□ -1
HDAC6-233ENST00000489352 NFYBP25208 207 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 CD34P28906 385 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 PYCR1P32322 319 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 GDNFP39905 211 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 CRYBA2P53672 197 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 MADCAM1Q13477 382 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 WHAMMP3Q1A5X7 153 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 LYPD4Q6UWN0 246 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 MOB3BQ86TA1 216 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 ZNF575Q86XF7 245 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.78□□□□□ -1
HDAC6-233ENST00000489352 TMEM217Q8N7C4 229 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 OR2T10Q8NGZ9 312 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 OR9G1Q8NH87 305 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 TSPEARQ8WU66 669 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 RSRC1Q96IZ7 334 aaKnown RBP8.78□□□□□ -1
HDAC6-233ENST00000489352 OR52B2Q96RD2 323 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 PAIP2Q9BPZ3 127 aaKnown RBP8.78□□□□□ -1
HDAC6-233ENST00000489352 CHST6Q9GZX3 395 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 TOLLIPQ9H0E2 274 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 ETAA1Q9NY74 926 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 OR6C3Q9NZP0 311 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 ZNF319Q9P2F9 582 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 ENPP5Q9UJA9 477 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 DNAH6Q9C0G6 4158 aa8.78□□□□□ -1
HDAC6-233ENST00000489352 A0A1W2PPI3 338 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 UNC119BA6NIH7 251 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 GSC2O15499 205 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 LGALS1P09382 135 aaKnown RBP8.77□□□□□ -1.01
HDAC6-233ENST00000489352 FMO3P31513 532 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC6-233ENST00000489352 IFFO1Q0D2I5 559 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 ZNF684Q5T5D7 378 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 DLEU7Q6UYE1 221 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 LYG2Q86SG7 212 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 FUNDC1Q8IVP5 155 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 Q8N9W7 124 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 TMEM106AQ96A25 262 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 EAF1Q96JC9 268 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-233ENST00000489352 HSPB9Q9BQS6 159 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 OVOL2Q9BRP0 275 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 IFT27Q9BW83 186 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 KAT8Q9H7Z6 458 aaKnown RBP8.77□□□□□ -1.01
HDAC6-233ENST00000489352 SRD5A3Q9H8P0 318 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 SLC2A8Q9NY64 477 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 MRM2Q9UI43 246 aaKnown RBP8.77□□□□□ -1.01
HDAC6-233ENST00000489352 SLC7A11Q9UPY5 501 aa8.77□□□□□ -1.01
HDAC6-233ENST00000489352 DHRS12A0PJE2 317 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 FUOMA2VDF0 154 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 J3KTA2 159 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 SLC6A6P31641 620 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 TNFRSF9Q07011 255 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 LRRC23Q53EV4 343 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-233ENST00000489352 LCN1P1Q5VSP4 162 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 COMMD2Q86X83 199 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 Q8N1X5 172 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 Q8N402 240 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 DEFB125Q8N687 156 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 EIF1ADQ8N9N8 165 aaKnown RBP8.76□□□□□ -1.01
HDAC6-233ENST00000489352 OR2T4Q8NH00 348 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 HAVCR2Q8TDQ0 301 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 NEURL2Q9BR09 285 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 SLC25A19Q9HC21 320 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 HES4Q9HCC6 221 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 SCRT2Q9NQ03 307 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 TAS2R3Q9NYW6 316 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 COMMD3-BMI1R4GMX3 469 aa8.76□□□□□ -1.01
HDAC6-233ENST00000489352 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
HDAC6-233ENST00000489352 TMEM82A0PJX8 343 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 DLGAP1O14490 977 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 MGST3O14880 152 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 ARPC3O15145 178 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 IFNA4P05014 189 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 H2BFMP0C1H6 154 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 PTGFRP43088 359 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 P2RX3P56373 397 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 EWSR1Q01844 656 aaKnown RBP eCLIP8.75□□□□□ -1.01
HDAC6-233ENST00000489352 AGKQ53H12 422 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 CYBRD1Q53TN4 286 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 PRSS45Q7RTY3 260 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 OR51L1Q8NGJ5 315 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms