RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 FAM209AQ5JX71 171 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 WDR82Q6UXN9 313 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 DCDC5Q6ZRR9 648 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 DNM1P46Q6ZS02 220 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 ZNF826PQ6ZT77 177 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 C6orf201Q7Z4U5 140 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 RTN4RL2Q86UN3 420 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 MOGAT3Q86VF5 341 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 OR10Z1Q8NGY1 313 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 LRRC29Q8WV35 223 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 ST8SIA4Q92187 359 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 DECR2Q9NUI1 292 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 FAIMQ9NVQ4 179 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 IL36RNQ9UBH0 155 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 ZNF107Q9UII5 783 aaPredicted RBP8.48□□□□□ -1.05
USP11-211ENST00000489111 ELF5Q9UKW6 265 aaPredicted RBP8.48□□□□□ -1.05
USP11-211ENST00000489111 NBASA2RRP1 2371 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 FAM240BA0A1B0GVZ2 78 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 ANKRD20A5PA0PJZ0 165 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 NAP1L6A6NFF2 107 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 LRRC30A6NM36 301 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 ZNF736B4DX44 427 aaPredicted RBP8.47□□□□□ -1.05
USP11-211ENST00000489111 C19orf84I3L1E1 186 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 SH2D1BO14796 132 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 DEGS1O15121 323 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 PLA2G10O15496 165 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 SSX5O60225 188 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 MT-ND4P03905 459 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 FCER2P06734 321 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 CD55P08174 381 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 IRF2P14316 349 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 ZNF44P15621 663 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 GLRA1P23415 457 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 LOXP28300 417 aaPredicted RBP8.47□□□□□ -1.05
USP11-211ENST00000489111 DUSP1P28562 367 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 GATA4P43694 442 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 TAS2R19P59542 299 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 CCL8P80075 99 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 PDCD1Q15116 288 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 OLFML2AQ68BL7 652 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 SIGIRRQ6IA17 410 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 MEX3BQ6ZN04 569 aaKnown RBP8.47□□□□□ -1.05
USP11-211ENST00000489111 NRARPQ7Z6K4 114 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 C11orf53Q8IXP5 236 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 MUC15Q8N387 334 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 BOLLQ8N9W6 283 aaKnown RBP8.47□□□□□ -1.05
USP11-211ENST00000489111 DEDD2Q8WXF8 326 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 HPS1Q92902 700 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 FBXW5Q969U6 566 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 ERGIC1Q969X5 290 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 CMSS1Q9BQ75 279 aaKnown RBP8.47□□□□□ -1.05
USP11-211ENST00000489111 SULT4A1Q9BR01 284 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 FAAP24Q9BTP7 215 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 MS4A5Q9H3V2 200 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 SAP30LQ9HAJ7 183 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 CHMP1AQ9HD42 196 aaPredicted RBP8.47□□□□□ -1.05
USP11-211ENST00000489111 C12orf4Q9NQ89 552 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 ZNF701Q9NV72 531 aaPredicted RBP8.47□□□□□ -1.05
USP11-211ENST00000489111 MCUBQ9NWR8 336 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 RASL12Q9NYN1 266 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 DNAJB11Q9UBS4 358 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 FBXO9Q9UK97 447 aaPredicted RBP8.47□□□□□ -1.05
USP11-211ENST00000489111 KCNK7Q9Y2U2 307 aa8.47□□□□□ -1.05
USP11-211ENST00000489111 UBE2QL1A1L167 161 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 MCRIP1C9JLW8 97 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 PYCARD-AS1I3L0S3 204 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 HSPB6O14558 160 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 WNT9BO14905 357 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 HAND1O96004 215 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 KNG1P01042 644 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 AKAIN1P0CW23 69 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 IGFBP2P18065 325 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 AMY2BP19961 511 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 TBPP20226 339 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 CFHR2P36980 270 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 PMELP40967 661 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 RFX2P48378 723 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 RBM39Q14498 530 aaKnown RBP8.46□□□□□ -1.06
USP11-211ENST00000489111 ACTBL2Q562R1 376 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 PAN3Q58A45 887 aaKnown RBP8.46□□□□□ -1.06
USP11-211ENST00000489111 RNASE10Q5GAN6 216 aaKnown RBP8.46□□□□□ -1.06
USP11-211ENST00000489111 ACP7Q6ZNF0 438 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 GDPD3Q7L5L3 318 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 FAM90A1Q86YD7 464 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 TMEM229BQ8NBD8 167 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 LILRB1Q8NHL6 650 aaPredicted RBP8.46□□□□□ -1.06
USP11-211ENST00000489111 DPAGT1Q9H3H5 408 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 OCEL1Q9H607 264 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 IFT22Q9H7X7 185 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 HES4Q9HCC6 221 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 HRASLSQ9HDD0 168 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 ZNF581Q9P0T4 197 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 RCC2Q9P258 522 aaKnown RBP8.46□□□□□ -1.06
USP11-211ENST00000489111 RNF7Q9UBF6 113 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 OR14J1Q9UGF5 321 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 AK3Q9UIJ7 227 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 PPP1R3CQ9UQK1 317 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 PLEKHA6Q9Y2H5 1048 aa8.46□□□□□ -1.06
USP11-211ENST00000489111 KLF2Q9Y5W3 355 aaPredicted RBP8.46□□□□□ -1.06
USP11-211ENST00000489111 NPTNQ9Y639 398 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms