RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ZNF286AQ9HBT8 521 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 HES4Q9HCC6 221 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 PCDHB16Q9NRJ7 776 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 DCAF13Q9NV06 445 aaKnown RBP7.23□□□□□ -1.25
COL17A1-207ENST00000488320 UBE2J1Q9Y385 318 aaPredicted RBP7.23□□□□□ -1.25
COL17A1-207ENST00000488320 CDH10Q9Y6N8 788 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 RYR1P21817 5038 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 PCLOQ9Y6V0 5065 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 TRGV10A0A0A0MS01 117 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A18PA6NE21 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A16PA6NEW6 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A20PA6NIJ5 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A9PA6NNJ1 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A12PA8MX19 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A5PA8MXJ8 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 OVOL1O14753 267 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 RRP9O43818 475 aaKnown RBP7.22□□□□□ -1.25
COL17A1-207ENST00000488320 IFNGP01579 166 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A15PP0C7V4 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A13PP0C7W8 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A14PP0C7W9 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FAM90A24PP0C7X0 464 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 IGHV4-30-4P0DP06 118 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 ZNF616Q08AN1 781 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 KLF10Q13118 480 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 FHL3Q13643 280 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 CLVS2Q5SYC1 327 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 HEPN1Q6WQI6 88 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 KRT74Q7RTS7 529 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 ARPINQ7Z6K5 226 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 SLC15A3Q8IY34 581 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 OR52N4Q8NGI2 321 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 OR4D6Q8NGJ1 314 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 ITFG2Q969R8 447 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 C7orf34Q96L11 122 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 DHRS1Q96LJ7 313 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 TSSK6Q9BXA6 273 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 NMNAT2Q9BZQ4 307 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 MED20Q9H944 212 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 TMBIM4Q9HC24 238 aa7.22□□□□□ -1.25
COL17A1-207ENST00000488320 A0A0U1RQV5 110 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 FAM230AA0A1W2PPH8 454 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 PQLC2LA1A4F0 135 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 FUOMA2VDF0 154 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 LY6LH3BQJ8 138 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 MGST3O14880 152 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 GMNNO75496 209 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 HAND1O96004 215 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 IGKV1D-33P01593 117 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 IGKV1-33P01594 117 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 IGHA1P01876 353 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 ZNF3P17036 446 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 VDAC1P21796 283 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 NFYBP25208 207 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 GPR12P47775 334 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 PSMA6P60900 246 aaKnown RBP7.21□□□□□ -1.26
COL17A1-207ENST00000488320 ERVK11-1P61568 191 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 IL24Q13007 206 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 LINC01590Q5TEZ4 76 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 GLYATQ6IB77 296 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 TMEM65Q6PI78 240 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 OR51E1Q8TCB6 317 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 DCUN1D4Q92564 292 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 EMG1Q92979 244 aaKnown RBP7.21□□□□□ -1.26
COL17A1-207ENST00000488320 SLAMF9Q96A28 289 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 CEP19Q96LK0 163 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 OR5B12Q96R08 314 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 OR51V1Q9H2C8 321 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 GPR84Q9NQS5 396 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 MRGBPQ9NV56 204 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 TAS2R1Q9NYW7 299 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 IL20Q9NYY1 176 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 SAMD4AQ9UPU9 718 aaKnown RBP7.21□□□□□ -1.26
COL17A1-207ENST00000488320 AMMECR1Q9Y4X0 333 aaPredicted RBP7.21□□□□□ -1.26
COL17A1-207ENST00000488320 V9GYQ6 96 aa7.21□□□□□ -1.26
COL17A1-207ENST00000488320 TMEM269A0A1B0GVZ9 245 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 A6NIN4 97 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 ACOD1A6NK06 481 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 FAM183AA6NL82 134 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 RIIAD1A6NNX1 92 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 F8VVB4 439 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 F8VWA3 439 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 DLGAP1O14490 977 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 MPZP25189 248 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 DUSP1P28562 367 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 CD34P28906 385 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 ERP29P30040 261 aaKnown RBP7.2□□□□□ -1.26
COL17A1-207ENST00000488320 RRM2P31350 389 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 GDNFP39905 211 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 P2RX3P56373 397 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 TRPM8Q7Z2W7 1104 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 ENTHD1Q8IYW4 607 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 RNF152Q8N8N0 203 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 OR2T33Q8NG76 320 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 OR8D4Q8NGM9 314 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 OTOSQ8NHW6 89 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 MCUR1Q96AQ8 359 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 EME1Q96AY2 570 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 RCN3Q96D15 328 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 RASL11BQ9BPW5 248 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms