RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 FAM90A18PA6NE21 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A16PA6NEW6 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A20PA6NIJ5 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A9PA6NNJ1 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A12PA8MX19 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A5PA8MXJ8 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 MAGEB4O15481 346 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-228ENST00000487354 ZNF254O75437 659 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 ZFPL1O95159 310 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 HAND1O96004 215 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A15PP0C7V4 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A13PP0C7W8 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A14PP0C7W9 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 FAM90A24PP0C7X0 464 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 CCL1P22362 96 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 CDK5Q00535 292 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 APOFQ13790 326 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 UBE2V2Q15819 145 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 SNAPC1Q16533 368 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 HLA-DRB5Q30154 266 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 ZNF829Q3KNS6 432 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-228ENST00000487354 TPTE2P1Q5T6R2 138 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 PLEKHG7Q6ZR37 379 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 ELMOD2Q8IZ81 293 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 KLHL30-AS1Q8NEE0 82 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 ACTR3BQ9P1U1 418 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 UBE2J1Q9Y385 318 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-228ENST00000487354 MOB4Q9Y3A3 225 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 HSPE1-MOB4S4R3N1 261 aa12.1□□□□□ -0.47
MCF2L-228ENST00000487354 ARRDC5A6NEK1 342 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 DHRS7CA6NNS2 312 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 LEUTXA8MZ59 168 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 RAMP3O60896 148 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 INMTO95050 263 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 ERP29P30040 261 aaKnown RBP12.09□□□□□ -0.47
MCF2L-228ENST00000487354 SLC6A1P30531 599 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 RIDAP52758 137 aaKnown RBP12.09□□□□□ -0.47
MCF2L-228ENST00000487354 P2RX3P56373 397 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 RPS7P62081 194 aaKnown RBP12.09□□□□□ -0.47
MCF2L-228ENST00000487354 ESRRGP62508 458 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 HEPN1Q6WQI6 88 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 PIGWQ7Z7B1 504 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 RTN4RL2Q86UN3 420 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 ZNF596Q8TC21 504 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 CAPSLQ8WWF8 208 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 STMN2Q93045 179 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 RBFOX1Q9NWB1 397 aaKnown RBP12.09□□□□□ -0.47
MCF2L-228ENST00000487354 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 LINC00527Q9UJ94 153 aa12.09□□□□□ -0.47
MCF2L-228ENST00000487354 A0A087X0M5 115 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 LCE6AA0A183 80 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 A0A1B0GX30 115 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 FAM230AA0A1W2PPH8 454 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 LOC110117498-PIK3R3F6TDL0 507 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 H3BUI4 141 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 M0QZK8 103 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 E2F6O75461 281 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 GABRR1P24046 479 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 CDK2P24941 298 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 PEX2P28328 305 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 DUSP1P28562 367 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 NPBWR2P48146 333 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 SLC25A26Q70HW3 274 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 DEFB107AQ8IZN7 70 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 C5orf56Q8N8D9 126 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 GIPC3Q8TF64 312 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 EMG1Q92979 244 aaKnown RBP12.08□□□□□ -0.48
MCF2L-228ENST00000487354 APOL4Q9BPW4 351 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 MOB1AQ9H8S9 216 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 PAPOLBQ9NRJ5 636 aaKnown RBP12.08□□□□□ -0.48
MCF2L-228ENST00000487354 ZFP57Q9NU63 452 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 ARL8BQ9NVJ2 186 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 OR52A1Q9UKL2 312 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 R4GMQ9 66 aa12.08□□□□□ -0.48
MCF2L-228ENST00000487354 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 MGST3O14880 152 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 ENTPD6O75354 484 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 ZNF146Q15072 292 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 DEFB136Q30KP8 78 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 SPATS1Q496A3 300 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 BCL2L15Q5TBC7 163 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 TMEM236Q5W0B7 351 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 ZNF695Q8IW36 515 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 HS3ST5Q8IZT8 346 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 CHPT1Q8WUD6 406 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 ASB17Q8WXJ9 295 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 CORO2AQ92828 525 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 ELAC2Q9BQ52 826 aaKnown RBP12.07□□□□□ -0.48
MCF2L-228ENST00000487354 SLC25A19Q9HC21 320 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 MRM2Q9UI43 246 aaKnown RBP12.07□□□□□ -0.48
MCF2L-228ENST00000487354 IKZF2Q9UKS7 526 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 SORL1Q92673 2214 aa12.07□□□□□ -0.48
MCF2L-228ENST00000487354 A0A1W2PPI3 338 aa12.06□□□□□ -0.48
MCF2L-228ENST00000487354 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
MCF2L-228ENST00000487354 CCL24O00175 119 aa12.06□□□□□ -0.48
MCF2L-228ENST00000487354 HMGN1P05114 100 aa12.06□□□□□ -0.48
MCF2L-228ENST00000487354 CALCBP10092 127 aa12.06□□□□□ -0.48
MCF2L-228ENST00000487354 OSMP13725 252 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms