RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 SPICQ8N5J4 248 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 OR2Z1Q8NG97 314 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 KCNG3Q8TAE7 436 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 RFT1Q96AA3 541 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 DIRAS2Q96HU8 199 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 GAL3ST1Q99999 423 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 PKIBQ9C010 78 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 FGF23Q9GZV9 251 aaPredicted RBP14.28□□□□□ -0.12
VIM-205ENST00000485947 CST11Q9H112 138 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 METTL9Q9H1A3 318 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 NARFLQ9H6Q4 476 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 PCDHB16Q9NRJ7 776 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 RHBDL2Q9NX52 303 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 IL36GQ9NZH8 169 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 NPTNQ9Y639 398 aa14.28□□□□□ -0.12
VIM-205ENST00000485947 A0A0G2JMP0 313 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 A0A0X1KG70 313 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 TMEM14DPA8MWL7 114 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 MLNRO43193 412 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 ZNF780AO75290 641 aaPredicted RBP14.27□□□□□ -0.13
VIM-205ENST00000485947 EIF4EP06730 217 aaKnown RBP14.27□□□□□ -0.13
VIM-205ENST00000485947 TMEM225BP0DP42 221 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 ELK1P19419 428 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 PTBP1P26599 531 aaKnown RBP eCLIP14.27□□□□□ -0.13
VIM-205ENST00000485947 SRP9P49458 86 aaKnown RBP14.27□□□□□ -0.13
VIM-205ENST00000485947 PDZK1IP1Q13113 114 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 ZNF181Q2M3W8 571 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 AVPI1Q5T686 147 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 BAIAP2L2Q6UXY1 529 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 Q6ZR03 302 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 MKXQ8IYA7 352 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 MFSD4AQ8N468 514 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 CELF2-AS1Q8N7Q2 184 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 OR4M2Q8NGB6 313 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 OR5D18Q8NGL1 313 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 DVL3Q92997 716 aaPredicted RBP14.27□□□□□ -0.13
VIM-205ENST00000485947 SLC25A38Q96DW6 304 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 C1orf147Q96MC9 270 aaPredicted RBP14.27□□□□□ -0.13
VIM-205ENST00000485947 NKX3-1Q99801 234 aaPredicted RBP14.27□□□□□ -0.13
VIM-205ENST00000485947 METRNQ9UJH8 293 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 RAB22AQ9UL26 194 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 ING4Q9UNL4 249 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 PPP1R3CQ9UQK1 317 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 CACNG2Q9Y698 323 aa14.27□□□□□ -0.13
VIM-205ENST00000485947 J3QT63 122 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 SCGNO76038 276 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 TPPPO94811 219 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 CYB5AP00167 134 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 VSIG8P0DPA2 414 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 MPZP25189 248 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 CD200P41217 278 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 HAAOP46952 286 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 QRFPP83859 136 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 CNIH2Q6PI25 160 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 MUC20Q8N307 709 aaPredicted RBP14.26□□□□□ -0.13
VIM-205ENST00000485947 ERGIC1Q969X5 290 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 S100A16Q96FQ6 103 aaKnown RBP14.26□□□□□ -0.13
VIM-205ENST00000485947 OR51I2Q9H344 312 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 EXTL2Q9UBQ6 330 aa14.26□□□□□ -0.13
VIM-205ENST00000485947 A0A0A6YYH2 397 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 A6NJ64 397 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 FOXH1O75593 365 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 IGHV2-70P01814 119 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 CD40LGP29965 261 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 IL24Q13007 206 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 IL17RELQ6ZVW7 336 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 CALHM1Q8IU99 346 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 CMTM4Q8IZR5 234 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 PIP4P2Q8N4L2 257 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 OR2V2Q96R30 315 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 RHOFQ9HBH0 211 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 GCM1Q9NP62 436 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 POLDIP2Q9Y2S7 368 aa14.25□□□□□ -0.13
VIM-205ENST00000485947 POLR3KQ9Y2Y1 108 aaPredicted RBP14.25□□□□□ -0.13
VIM-205ENST00000485947 METTL21EPA6NDL7 271 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 FABP12A6NFH5 140 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 LRRC30A6NM36 301 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 H0YL77 283 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 SPRY1O43609 319 aaPredicted RBP14.24□□□□□ -0.13
VIM-205ENST00000485947 TCF21O43680 179 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 KDM4BO94953 1096 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 PTBP3O95758 552 aaKnown RBP14.24□□□□□ -0.13
VIM-205ENST00000485947 CSTBP04080 98 aaKnown RBP14.24□□□□□ -0.13
VIM-205ENST00000485947 MDH2P40926 338 aaKnown RBP14.24□□□□□ -0.13
VIM-205ENST00000485947 MNDAP41218 407 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 GATA4P43694 442 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 BTG1P62324 171 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 UNC119Q13432 240 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 RSU1Q15404 277 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 FAM131AQ6UXB0 335 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 SLC25A26Q70HW3 274 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 C1QL2Q7Z5L3 287 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 C1orf87Q8N0U7 546 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 OR4M1Q8NGD0 313 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 OR10AD1Q8NGE0 317 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 ITLN1Q8WWA0 313 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 FAM46BQ96A09 425 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 PHF21AQ96BD5 680 aa14.24□□□□□ -0.13
VIM-205ENST00000485947 MRPS24Q96EL2 167 aaKnown RBP14.24□□□□□ -0.13
VIM-205ENST00000485947 SOSTQ9BQB4 213 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms