RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 RNF144BQ7Z419 303 aa10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 FAM58AQ8N1B3 248 aa10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 KLHDC1Q8N7A1 406 aa10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 OR2G2Q8NGZ5 317 aa10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 RPS4Y2Q8TD47 263 aa10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 FGGYQ96C11 551 aa10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 HRASLS5Q96KN8 279 aa10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 NKX3-1Q99801 234 aaPredicted RBP10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 TCF19Q9Y242 345 aa10.88□□□□□ -0.67
CTDSP1-208ENST00000482272 TET2Q6N021 2002 aaPredicted RBP10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 TMEM82A0PJX8 343 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 J3QRE1 110 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ENTPD6O75354 484 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ISG15P05161 165 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 HTR1AP08908 422 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 VSIG10L2P0DP72 767 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 GABRR1P24046 479 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 AZGP1P25311 298 aaKnown RBP10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 POU3F4P49335 361 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 CCR9P51686 369 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ACTA2P62736 377 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ACTG2P63267 376 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ZNF91Q05481 1191 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 SPIN3Q5JUX0 258 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 FDX2Q6P4F2 183 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ZBTB49Q6ZSB9 765 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 UTS2BQ765I0 119 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 DYNAPQ8N1N2 210 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ZNF676Q8N7Q3 588 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 OR52N4Q8NGI2 321 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 SPSB1Q96BD6 273 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 RNFT2Q96EX2 444 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 ADAT3Q96EY9 351 aaPredicted RBP10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 MRPL48Q96GC5 212 aaKnown RBP10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 NEK6Q9HC98 313 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 FRRS1LQ9P0K9 344 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 FOXJ3Q9UPW0 622 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 LINC00312Q9Y6C7 94 aa10.87□□□□□ -0.67
CTDSP1-208ENST00000482272 IGKV1-9A0A0C4DH69 117 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 TRBV2A0A0J9YWF9 115 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 FUOMA2VDF0 154 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 SH2D1BO14796 132 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 MGST3O14880 152 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 CHST1O43916 411 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 PEX14O75381 377 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 ALPLP05186 524 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 PRKACAP17612 351 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 BCL3P20749 454 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 ERP29P30040 261 aaKnown RBP10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 NPBWR2P48146 333 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 NANOS3P60323 173 aaKnown RBP10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 SNRPGP62308 76 aaKnown RBP10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 PDZK1IP1Q13113 114 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 ZNF146Q15072 292 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 MINOS1Q5TGZ0 78 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 TRAPPC6BQ86SZ2 158 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 C10orf67Q8IYJ2 551 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 ACBD7Q8N6N7 88 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 TPRX1Q8N7U7 411 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 OR10AC1Q8NH08 325 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 CFHR4Q92496 578 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 OPALINQ96PE5 141 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 MBOAT4Q96T53 435 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 PRSS22Q9GZN4 317 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 CHST6Q9GZX3 395 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 RBFOX1Q9NWB1 397 aaKnown RBP10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 HHLA2Q9UM44 414 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 PCDHGB5Q9Y5G0 923 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 SESN1Q9Y6P5 492 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 MINOS1-NBL1R4GNA1 71 aa10.86□□□□□ -0.67
CTDSP1-208ENST00000482272 A6NDX4 124 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 J3QLW9 94 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 EI24O14681 340 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 SLC16A6O15403 523 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 PSPNO60542 156 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 IGHA1P01876 353 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 RPSAP08865 295 aaKnown RBP10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 ZNF19P17023 458 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 DUSP1P28562 367 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 ALDH3A2P51648 485 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 DYNLT3P51808 116 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 SNU13P55769 128 aaKnown RBP10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 EMX1Q04741 257 aaPredicted RBP10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 SLC34A1Q06495 639 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 KPNB1Q14974 876 aaKnown RBP10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 ZIK1Q3SY52 487 aaPredicted RBP10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 ARSJQ5FYB0 599 aaPredicted RBP10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 OR52W1Q6IF63 320 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 CCBE1Q6UXH8 406 aaPredicted RBP10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 OR4S1Q8NGB4 309 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 OR13C3Q8NGS6 347 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 NDNFQ8TB73 568 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 CLEC7AQ9BXN2 247 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 RHOFQ9HBH0 211 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 HMG20AQ9NP66 347 aa10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 EXOSC4Q9NPD3 245 aaKnown RBP10.85□□□□□ -0.67
CTDSP1-208ENST00000482272 EXOGQ9Y2C4 368 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms