RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MTCH1Q9NZJ7 389 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.34□□□□□ -0.91
CCM2-213ENST00000480658 UBE2J1Q9Y385 318 aaPredicted RBP9.34□□□□□ -0.91
CCM2-213ENST00000480658 MINOS1-NBL1R4GNA1 71 aa9.34□□□□□ -0.91
CCM2-213ENST00000480658 APOL3O95236 402 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 IGHA1P01876 353 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 CSN2P05814 226 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 GABRR1P24046 479 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 DYNLT3P51808 116 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 GBX2P52951 348 aaPredicted RBP9.33□□□□□ -0.92
CCM2-213ENST00000480658 OR12D2P58182 307 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 PROK1P58294 105 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 ZNF91Q05481 1191 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 KLRD1Q13241 179 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 ALKBH1Q13686 389 aaKnown RBP9.33□□□□□ -0.92
CCM2-213ENST00000480658 GRK1Q15835 563 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 ZSCAN26Q16670 478 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 CCDC58Q4VC31 144 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 LPCAT4Q643R3 524 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 Q6ZTK2 550 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 PQLC1Q8N2U9 271 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 OR4M1Q8NGD0 313 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 OR5AK2Q8NH90 309 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 RPS4Y2Q8TD47 263 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 AJUBAQ96IF1 538 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 AKR1E2Q96JD6 320 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 ZNF488Q96MN9 340 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 JAM3Q9BX67 310 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 ELL3Q9HB65 397 aaPredicted RBP9.33□□□□□ -0.92
CCM2-213ENST00000480658 EXOSC4Q9NPD3 245 aaKnown RBP9.33□□□□□ -0.92
CCM2-213ENST00000480658 FRRS1LQ9P0K9 344 aa9.33□□□□□ -0.92
CCM2-213ENST00000480658 TRGV10A0A0A0MS01 117 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 LOC100130705A0A1B0GUX0 176 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 A6NIN4 97 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 H3BNX3 289 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 J3QLW9 94 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 SULT1B1O43704 296 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 ARG1P05089 322 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 IGHV1-8P0DP01 117 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 ZNF19P17023 458 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 PRKACAP17612 351 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 CEACAM3P40198 252 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 KIR3DL2P43630 455 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 KIR2DS4P43632 304 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 POU3F4P49335 361 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 P2RX3P56373 397 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 PDZK1IP1Q13113 114 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 DMRTC1Q5HYR2 192 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 ZNF626Q68DY1 528 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 TMPRSS11AQ6ZMR5 421 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 Q6ZSV7 163 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 TRAPPC6BQ86SZ2 158 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 RTN4RL2Q86UN3 420 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 SETD9Q8NE22 299 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 ZNF596Q8TC21 504 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 LGALS12Q96DT0 336 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 PELI1Q96FA3 418 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 PPA2Q9H2U2 334 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 ZCCHC4Q9H5U6 513 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 S100A14Q9HCY8 104 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 PCDHB16Q9NRJ7 776 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 MRPS18AQ9NVS2 196 aaKnown RBP9.32□□□□□ -0.92
CCM2-213ENST00000480658 SMPD3Q9NY59 655 aaPredicted RBP9.32□□□□□ -0.92
CCM2-213ENST00000480658 DHDHQ9UQ10 334 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 SESN1Q9Y6P5 492 aa9.32□□□□□ -0.92
CCM2-213ENST00000480658 IGKV1-27A0A075B6S5 117 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 FAM90A8PA6NJQ4 464 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 ODF3BA8MYP8 253 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 E9PQ18 207 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 KDM4BO94953 1096 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 HCKP08631 526 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 MYL12AP19105 171 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 COX7A1P24310 79 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 MTNR1BP49286 362 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 CEBPDP49716 269 aaPredicted RBP9.31□□□□□ -0.92
CCM2-213ENST00000480658 ZNF273Q14593 569 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 ZIK1Q3SY52 487 aaPredicted RBP9.31□□□□□ -0.92
CCM2-213ENST00000480658 HCP5Q6MZN7 132 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 CCDC144NLQ6NUI1 221 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 C16orf82Q7Z2V1 217 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 PNKDQ8N490 385 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 PARP16Q8N5Y8 322 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 PACRGLQ8N7B6 248 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 RHOXF1Q8NHV9 184 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 TSEN15Q8WW01 171 aaKnown RBP9.31□□□□□ -0.92
CCM2-213ENST00000480658 THRSPQ92748 146 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 FGGYQ96C11 551 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 ADAT3Q96EY9 351 aaPredicted RBP9.31□□□□□ -0.92
CCM2-213ENST00000480658 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 HMG20AQ9NP66 347 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 PAK1IP1Q9NWT1 392 aaPredicted RBP9.31□□□□□ -0.92
CCM2-213ENST00000480658 CHCHD3Q9NX63 227 aaKnown RBP9.31□□□□□ -0.92
CCM2-213ENST00000480658 TAS2R3Q9NYW6 316 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 OR6C3Q9NZP0 311 aa9.31□□□□□ -0.92
CCM2-213ENST00000480658 A0A1W2PRD5 423 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 A0A1W2PRF3 423 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 A0A1W2PRM7 423 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 OR4C45A6NMZ5 311 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 F2RL2O00254 374 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 PEX14O75381 377 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms