RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ZNF850A8MQ14 1090 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF724A8MTY0 619 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A22PA8MWA6 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A12PA8MX19 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A5PA8MXJ8 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A23PA8MXZ1 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 F5H0A9 414 aaPredicted RBP5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 RRP8O43159 456 aaKnown RBP5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 SSX5O60225 188 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 SPDEFO95238 335 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 ACTL6AO96019 429 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 IFNA2P01563 188 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A15PP0C7V4 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A13PP0C7W8 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A14PP0C7W9 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A24PP0C7X0 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 COX5BP10606 129 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 LIPCP11150 499 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 TPT1P13693 172 aaKnown RBP5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 KLK2P20151 261 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 M6PRP20645 277 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 DTYMKP23919 212 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 PSMB6P28072 239 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 NPY4RP50391 375 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 HERV-K104P61576 105 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 SRPXP78539 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 PSG4Q00888 419 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 SRYQ05066 204 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 BAMBIQ13145 260 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 MRPL49Q13405 166 aaKnown RBP5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 OR8B8Q15620 311 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 AANATQ16613 207 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 LRRC37A5PQ49AS3 106 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 NHLRC3Q5JS37 347 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 TOR2AQ5JU69 321 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 DCAF10Q5QP82 559 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 PHYHD1Q5SRE7 291 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 DCAF12L2Q5VW00 463 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 IGFL4Q6B9Z1 124 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 TCEAL6Q6IPX3 200 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 MOB3CQ70IA8 216 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 GVQW1Q8N7I0 195 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM178AQ8NBL3 297 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 PXT1Q8NFP0 134 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 OR5L1Q8NGL2 311 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 AKR7LQ8NHP1 331 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 SSC4DQ8WTU2 575 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 PPP1R1CQ8WVI7 109 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 C17orf50Q8WW18 174 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 ST8SIA4Q92187 359 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 DCUN1D4Q92564 292 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 APOBEC3DQ96AK3 386 aaPredicted RBP5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 SGK3Q96BR1 496 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 ADGRG7Q96K78 797 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 LYZL4Q96KX0 146 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 CMSS1Q9BQ75 279 aaKnown RBP5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 LDAHQ9H6V9 325 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 RNF122Q9H9V4 155 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF286AQ9HBT8 521 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 IL36GQ9NZH8 169 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 GLS2Q9UI32 602 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 TNFSF18Q9UNG2 199 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FREM3P0C091 2139 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 RALGAPA1Q6GYQ0 2036 aa5.09□□□□□ -1.6
ATPAF1-204ENST00000474020 A0A0A6YYD4 124 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 IGKV1-9A0A0C4DH69 117 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 A0A0G2JMM0 328 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 A0A1W2PPB8 328 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 RPS10-NUDT3A0A1W2PQS6 291 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 A0A1W2PRS3 328 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ANKRD30BLA7E2S9 258 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 FAM166BA8MTA8 275 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 CEACAM18A8MTB9 384 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 KIR3DP1A8MWS1 328 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 G3V3Q6 166 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 TEX46H3BTG2 121 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 TAAR5O14804 337 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 PDCD6O75340 191 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 TOX4O94842 621 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 TNFSF15O95150 251 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 DIRAS3O95661 229 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 CRHP06850 196 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 CTSDP07339 412 aaPredicted RBP5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 RFPL3SP0C7P2 107 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF708P17019 499 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ZP3P21754 424 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 CALCRP30988 508 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 APLNRP35414 380 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 SERPINF1P36955 418 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 PMELP40967 661 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 PPIAP62937 165 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ARG2P78540 354 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ARF1P84077 181 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 Q0VFX4 171 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 FHL2Q14192 279 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ATXN7L3Q14CW9 347 aaPredicted RBP5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 SLC9A3R2Q15599 337 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 UBE2V2Q15819 145 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 SNAI3Q3KNW1 292 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 PABPC1L2AQ5JQF8 200 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms