RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 OR10G2Q8NGC3 310 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 OR2T29Q8NH02 315 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 SNX22Q96L94 193 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 NOL4LQ96MY1 436 aaPredicted RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 APOL4Q9BPW4 351 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 ELAC2Q9BQ52 826 aaKnown RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 CADM1Q9BY67 442 aaKnown RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 CHST6Q9GZX3 395 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 ZMAT4Q9H898 229 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 ZNF446Q9NWS9 450 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 FRRS1LQ9P0K9 344 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 NUFIP1Q9UHK0 495 aaKnown RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 LAMP5Q9UJQ1 280 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 SAMHD1Q9Y3Z3 626 aaKnown RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 SORL1Q92673 2214 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 H3BN98 237 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 H3BSH0 61 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 DLGAP1O14490 977 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 PRODHO43272 600 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 OR2F2O95006 317 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 HTR1DP28221 377 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 MYCNOSP40205 109 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 ECI1P42126 302 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 NPBWR2P48146 333 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 RAB25P57735 213 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 MEF2CQ06413 473 aaPredicted RBP7.35□□□□□ -1.23
VCL-204ENST00000472585 APOFQ13790 326 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 EDDM3AQ14507 147 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 PRAMEF5Q5TYX0 476 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 DEGS2Q6QHC5 323 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 ADAMTSL5Q6ZMM2 481 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 GDPD3Q7L5L3 318 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 C16orf82Q7Z2V1 217 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 OR2W3Q7Z3T1 314 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 BCDIN3DQ7Z5W3 292 aaKnown RBP7.35□□□□□ -1.23
VCL-204ENST00000472585 COMMD2Q86X83 199 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 ZNF679Q8IYX0 411 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 ELMOD2Q8IZ81 293 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 DEFB107AQ8IZN7 70 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 HS3ST5Q8IZT8 346 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 ABHD12Q8N2K0 398 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 OSR2Q8N2R0 312 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 TRMT10AQ8TBZ6 339 aaKnown RBP7.35□□□□□ -1.23
VCL-204ENST00000472585 TEX47Q8TBZ9 253 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 SLAMF9Q96A28 289 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 CLEC7AQ9BXN2 247 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 PKIBQ9C010 78 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 ZNF286AQ9HBT8 521 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 ACTR3BQ9P1U1 418 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 DPM3Q9P2X0 92 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 DNAJB9Q9UBS3 223 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 LINC00527Q9UJ94 153 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 POLDIP2Q9Y2S7 368 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 LINC00312Q9Y6C7 94 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 SMAD5-AS1Q9Y6J3 95 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 DSCAML1Q8TD84 2053 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 CSMD3Q7Z407 3707 aa7.35□□□□□ -1.23
VCL-204ENST00000472585 FAM230AA0A1W2PPH8 454 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 hADV38S2A0JD32 116 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A18PA6NE21 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A16PA6NEW6 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A20PA6NIJ5 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A9PA6NNJ1 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A12PA8MX19 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A5PA8MXJ8 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 JTBO76095 146 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A15PP0C7V4 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A13PP0C7W8 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A14PP0C7W9 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 FAM90A24PP0C7X0 464 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 PRKACGP22612 351 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 SLC6A1P30531 599 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 OR3A1P47881 315 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 LUMP51884 338 aaPredicted RBP7.34□□□□□ -1.23
VCL-204ENST00000472585 BDH1Q02338 343 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 DIAPH2-AS1Q14236 149 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 GRK1Q15835 563 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 C9orf152Q5JTZ5 239 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 C9orf66Q5T8R8 295 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 LCNL1Q6ZST4 164 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 GIPC3Q8TF64 312 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 STMN2Q93045 179 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 ITFG2Q969R8 447 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 RBMXL1Q96E39 390 aaKnown RBP7.34□□□□□ -1.23
VCL-204ENST00000472585 RAX2Q96IS3 184 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 MROQ9BYG7 248 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 YIPF3Q9GZM5 350 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 REEP1Q9H902 201 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 SEBOXQ9HB31 216 aaPredicted RBP7.34□□□□□ -1.23
VCL-204ENST00000472585 SCOCQ9UIL1 159 aa7.34□□□□□ -1.23
VCL-204ENST00000472585 PSMB11A5LHX3 300 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 ARRDC5A6NEK1 342 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 LY86O95711 162 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 HAND1O96004 215 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 CCL1P22362 96 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 GLIPR1P48060 266 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 RPS7P62081 194 aaKnown RBP7.33□□□□□ -1.24
VCL-204ENST00000472585 ESRRGP62508 458 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 ZNF91Q05481 1191 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms