RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 A0A1W2PQ09 198 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 F8VVB4 439 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 F8VWA3 439 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 SH2D1BO14796 132 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 ZNF780AO75290 641 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-211ENST00000472490 TOX4O94842 621 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 HAND1O96004 215 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 TK1P04183 234 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 CPEP16870 476 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 ADRA2CP18825 462 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 EPHA1P21709 976 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 PTGFRP43088 359 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 BPIFB3P59826 476 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 ZP1P60852 638 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 FGF12P61328 243 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 COL10A1Q03692 680 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 BLMHQ13867 455 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 GPR176Q14439 515 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 RSU1Q15404 277 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 KRTAP21-3Q3LHN1 58 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 ASPHD2Q6ICH7 369 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 KIR3DL3Q8N743 410 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 ASCC1Q8N9N2 400 aaKnown RBP11.75□□□□□ -0.53
BRCA1-211ENST00000472490 LY6G5BQ8NDX9 201 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 FCGR1BQ92637 280 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 UPRTQ96BW1 309 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 SLITRK2Q9H156 845 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 METTL9Q9H1A3 318 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 ELL3Q9HB65 397 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-211ENST00000472490 NOX4Q9NPH5 578 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 GSTK1Q9Y2Q3 226 aa11.75□□□□□ -0.53
BRCA1-211ENST00000472490 YLPM1P49750 1951 aaKnown RBP11.74□□□□□ -0.53
BRCA1-211ENST00000472490 IGKV1-12A0A0C4DH73 117 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 A0A1W2PPK0 400 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 K7N7A8 449 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 GABRPO00591 440 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 FCN3O75636 299 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 ARL6IP5O75915 188 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 IGKV1D-12P01611 117 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 CSTBP04080 98 aaKnown RBP11.74□□□□□ -0.53
BRCA1-211ENST00000472490 SFTPBP07988 381 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 SELLP14151 372 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 GABRA5P31644 462 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 MAP2K4P45985 399 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 EMX1Q04741 257 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-211ENST00000472490 PDCD1Q15116 288 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 GPR157Q5UAW9 335 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 ELP2Q6IA86 826 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 GDPD3Q7L5L3 318 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 CEACAM19Q7Z692 300 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 PHC2Q8IXK0 858 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 CHST4Q8NCG5 386 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 SNX22Q96L94 193 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 WDFY2Q96P53 400 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 PCGF1Q9BSM1 259 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 EXOSC4Q9NPD3 245 aaKnown RBP11.74□□□□□ -0.53
BRCA1-211ENST00000472490 ONECUT1Q9UBC0 465 aa11.74□□□□□ -0.53
BRCA1-211ENST00000472490 TRAV8-7A0A075B6U6 113 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 A0A0A6YYJ9 748 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 hCG_1809904A0A1W2PP81 198 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 A0A1W2PPE2 198 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 A0A1W2PR64 198 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 A0A1W2PRV1 198 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 FSHBP01225 129 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 TFF1P04155 84 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 MAS1P04201 325 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 GABRR1P24046 479 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 MTORP42345 2549 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 CEBPDP49716 269 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-211ENST00000472490 ARF6P62330 175 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 RPL31P62899 125 aaKnown RBP11.73□□□□□ -0.53
BRCA1-211ENST00000472490 HSD17B12Q53GQ0 312 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 CRIP3Q6Q6R5 217 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 UNQ9370/PRO34162Q6UXP9 181 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 ASCL4Q6XD76 172 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 OR8H2Q8N162 312 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 BPIFB2Q8N4F0 458 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 JAGN1Q8N5M9 183 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 ZNF418Q8TF45 676 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-211ENST00000472490 TMEM203Q969S6 136 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 FOXRED1Q96CU9 486 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-211ENST00000472490 UQCC2Q9BRT2 126 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 IL36GQ9NZH8 169 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 ING4Q9UNL4 249 aa11.73□□□□□ -0.53
BRCA1-211ENST00000472490 ZANQ9Y493 2812 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 FUOMA2VDF0 154 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 M0R1W7 72 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 PIN1P1O15428 100 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 TCF21O43680 179 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 SC5DO75845 299 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 RGS9O75916 674 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-211ENST00000472490 ZNF44P15621 663 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 SRMP19623 302 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 RANBP1P43487 201 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 OR3A4PP47883 348 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 KCTD21Q4G0X4 260 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 GLT8D1Q68CQ7 371 aa11.72□□□□□ -0.53
BRCA1-211ENST00000472490 RBMS3Q6XE24 437 aaKnown RBP11.72□□□□□ -0.53
BRCA1-211ENST00000472490 RNF144BQ7Z419 303 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms