RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TMEM225BP0DP42 221 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 GTF2F2P13984 249 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
HDAC6-215ENST00000465457 MGMTP16455 207 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 SELEP16581 610 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 RSU1Q15404 277 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 CDNFQ49AH0 187 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 ACTBL2Q562R1 376 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 DTX2Q86UW9 622 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 SAXO1Q8IYX7 474 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 CHST4Q8NCG5 386 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 NPRL2Q8WTW4 380 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 HPS1Q92902 700 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 GCDHQ92947 438 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-215ENST00000465457 SPACA5Q96QH8 159 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 NKX3-1Q99801 234 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-215ENST00000465457 BARX1Q9HBU1 254 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-215ENST00000465457 ARFGEF3Q5TH69 2177 aa11.76□□□□□ -0.53
HDAC6-215ENST00000465457 FAM230AA0A1W2PPH8 454 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 C7orf66A4D0T2 115 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 DPRXA6NFQ7 191 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 ANKRD30BLA7E2S9 258 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 TPD52L2O43399 206 aaKnown RBP11.75□□□□□ -0.53
HDAC6-215ENST00000465457 PEX14O75381 377 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 CCNKO75909 580 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 LYZL6O75951 148 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 LY6HO94772 140 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 NDUFB6O95139 128 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 VEGFCP49767 419 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 GNG2P59768 71 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 RBMS2Q15434 407 aaKnown RBP11.75□□□□□ -0.53
HDAC6-215ENST00000465457 CYB5R2Q6BCY4 276 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 STEAP1BQ6NZ63 245 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 FBXW12Q6X9E4 464 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 MOB3CQ70IA8 216 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 ZDHHC23Q8IYP9 409 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 TMEM104Q8NE00 496 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 OR56B2PQ8NGI1 322 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 OR51T1Q8NGJ9 327 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 PIGCQ92535 297 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 HIST1H2AAQ96QV6 131 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 GAL3ST1Q99999 423 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 USB1Q9BQ65 265 aaKnown RBP11.75□□□□□ -0.53
HDAC6-215ENST00000465457 PAPOLGQ9BWT3 736 aaKnown RBP11.75□□□□□ -0.53
HDAC6-215ENST00000465457 C20orf85Q9H1P6 137 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 IFT46Q9NQC8 304 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 MCUBQ9NWR8 336 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 PTTG3PQ9NZH4 202 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 ZNF221Q9UK13 617 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 ALG5Q9Y673 324 aa11.75□□□□□ -0.53
HDAC6-215ENST00000465457 PRKDCP78527 4128 aaKnown RBP11.75□□□□□ -0.53
HDAC6-215ENST00000465457 TMEM235A6NFC5 223 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 OR5B21A6NL26 309 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 ZNF736B4DX44 427 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-215ENST00000465457 IGKV3-15P01624 115 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 CD74P04233 296 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 PTHLHP12272 177 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 MPZP25189 248 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
HDAC6-215ENST00000465457 PRDX4Q13162 271 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 CEACAM21Q3KPI0 293 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 C3orf36Q3SXR2 165 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 MOGAT2Q3SYC2 334 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 CRIP3Q6Q6R5 217 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 CLEC2AQ6UVW9 174 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 C12orf54Q6X4T0 127 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 ZNF782Q6ZMW2 699 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-215ENST00000465457 BHLHA15Q7RTS1 189 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-215ENST00000465457 TRAPPC6BQ86SZ2 158 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 DRAXINQ8NBI3 349 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-215ENST00000465457 OR5A2Q8NGI9 324 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 OR5D18Q8NGL1 313 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 OR4C16Q8NGL9 310 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 MED30Q96HR3 178 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 SLC25A21Q9BQT8 299 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-215ENST00000465457 SELENOIQ9C0D9 397 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 ELL3Q9HB65 397 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-215ENST00000465457 RHOFQ9HBH0 211 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 MYEF2Q9P2K5 600 aaKnown RBP11.74□□□□□ -0.53
HDAC6-215ENST00000465457 ANAPC10Q9UM13 185 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 STARD10Q9Y365 291 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
HDAC6-215ENST00000465457 A0A0B4J293 547 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 PQLC2LA1A4F0 135 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A10PA6NDY2 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A18PA6NE21 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A16PA6NEW6 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A20PA6NIJ5 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A8PA6NJQ4 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A7PA6NKC0 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 OR5H1A6NKK0 313 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 CD300LBA8K4G0 201 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 ZNF850A8MQ14 1090 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A22PA8MWA6 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A12PA8MX19 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A5PA8MXJ8 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A23PA8MXZ1 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 DISC1C4P0D8 188 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms