RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ZNF286AQ9HBT8 521 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 TUBG2Q9NRH3 451 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 NECAP2Q9NVZ3 263 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 URB1O60287 2271 aaKnown RBP10.07□□□□□ -0.8
SMAD3-202ENST00000439724 GTF3C1Q12789 2109 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 RFPL4AA6NLU0 287 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 MCRIP1C9JLW8 97 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 RFPL4AL1F8VTS6 287 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 F8VVB4 439 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 F8VWA3 439 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 J3QT63 122 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 SYNGR1O43759 233 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 SFT2D2O95562 160 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 CXCL2P19875 107 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 SPINK2P20155 84 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 CA6P23280 308 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 NFYAP23511 347 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-202ENST00000439724 UCP2P55851 309 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 SEC61A1P61619 476 aaKnown RBP10.07□□□□□ -0.8
SMAD3-202ENST00000439724 IL13RA2Q14627 380 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 SRSF7Q16629 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMAD3-202ENST00000439724 UNQ6126/PRO20091Q6UXV3 157 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 Q6ZS49 121 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 SPACA3Q8IXA5 215 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 OR1J1Q8NGS3 322 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 LILRB4Q8NHJ6 448 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 SLC25A40Q8TBP6 338 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 CASTOR1Q8WTX7 329 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 DYRK2Q92630 601 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 EXTL1Q92935 676 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 ELMOD3Q96FG2 381 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 MICU1Q9BPX6 476 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-202ENST00000439724 ZNF442Q9H7R0 627 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 AMDHD2Q9Y303 409 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 FAM215AQ9Y5M1 114 aa10.07□□□□□ -0.8
SMAD3-202ENST00000439724 ZFHX2Q9C0A1 2572 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 LRP5LA4QPB2 252 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 TSC22D2O75157 780 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 HOXD4P09016 255 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 OR5H8P0DN80 308 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 SSTR2P30874 369 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 OPRM1P35372 400 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 TIMP3P35625 211 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 GMFBP60983 142 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 ERVS71-1P61550 626 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 FGL1Q08830 312 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 ZNF324BQ6AW86 544 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 BRICD5Q6PL45 260 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 FAM180AQ6UWF9 173 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 TEX261Q6UWH6 196 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 DHRS11Q6UWP2 260 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 BHLHA15Q7RTS1 189 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 OR8H1Q8NGG4 311 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 FAM57AQ8TBR7 257 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 CCDC120Q96HB5 630 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 ZNF2Q9BSG1 426 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 SCNM1Q9BWG6 230 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 CLEC4MQ9H2X3 399 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 SPACA1Q9HBV2 294 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 WASF3Q9UPY6 502 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 U3KQ87 197 aa10.06□□□□□ -0.8
SMAD3-202ENST00000439724 INTS1Q8N201 2190 aaKnown RBP10.06□□□□□ -0.8
SMAD3-202ENST00000439724 TRAV14DV4A0A0A6YYC5 116 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 OR5H1A6NKK0 313 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 L7N2F9 121 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 M0R233 179 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 AGFG2O95081 481 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 GLAP06280 429 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 CECR9P0C854 216 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 PGAM2P15259 253 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 RPS2P15880 293 aaKnown RBP10.05□□□□□ -0.8
SMAD3-202ENST00000439724 CALCRP30988 508 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
SMAD3-202ENST00000439724 SORDQ00796 357 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 BAMBIQ13145 260 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 OPCMLQ14982 345 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 PDCD1Q15116 288 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 FAM76BQ5HYJ3 339 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 SLC22A25Q6T423 547 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 CLEC18BQ6UXF7 455 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 Q6ZPA2 131 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 BATF2Q8N1L9 274 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 GTF3AQ92664 365 aaKnown RBP10.05□□□□□ -0.8
SMAD3-202ENST00000439724 MARS2Q96GW9 593 aaKnown RBP10.05□□□□□ -0.8
SMAD3-202ENST00000439724 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 IFT22Q9H7X7 185 aa10.05□□□□□ -0.8
SMAD3-202ENST00000439724 ESPL1Q14674 2120 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 FXYD6-FXYD2A0A087WZ82 144 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 FAM221AA4D161 298 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 TMEM210A6NLX4 147 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 CCSO14618 274 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 ARPC5O15511 151 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 MPC2O95563 127 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 NAPSAO96009 420 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 SLC25A4P12235 298 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 RPA2P15927 270 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 PRKACAP17612 351 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms