RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 MESP1Q9BRJ9 268 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 NDUFAF3Q9BU61 184 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 MRPL37Q9BZE1 423 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 SLC25A31Q9H0C2 315 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 LPAR5Q9H1C0 372 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 CHST11Q9NPF2 352 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 PLA2G2EQ9NZK7 142 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 DKKL1Q9UK85 242 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 PITPNC1Q9UKF7 332 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 COLQQ9Y215 455 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TMED3Q9Y3Q3 217 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 RP1L1Q8IWN7 2480 aaPredicted RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 F5H5K5 113 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 ASAH2BP0C7U1 165 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 PGA3P0DJD8 388 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 COX5BP10606 129 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 FCGR2AP12318 317 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 FSTP19883 344 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 ATP6V0CP27449 155 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 DUSP1P28562 367 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 GPR3P46089 330 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 MLF1P58340 268 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 NUTF2P61970 127 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 RUNX1Q01196 453 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TLE4Q04727 773 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TNFRSF9Q07011 255 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 C6orf201Q7Z4U5 140 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 C1QL4Q86Z23 238 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 ZNF695Q8IW36 515 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 SCGB1C1Q8TD33 95 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 NEK7Q8TDX7 302 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 SYT3Q9BQG1 590 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 ADAM19Q9H013 955 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TXNIPQ9H3M7 391 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 GPR173Q9NS66 373 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 TP53TG5Q9Y2B4 290 aa6.52□□□□□ -1.37
SYNPO2-203ENST00000434046 DENND4CQ5VZ89 1909 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 H3BP45 60 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 RAD51DO75771 328 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 TRAPPC6AO75865 159 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CNOT4O95628 575 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 OTX2P32243 289 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 NOVA1P51513 510 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 POLR2HP52434 150 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CLRN1P58418 232 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 C17orf67Q0P5P2 114 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 PLAC9Q5JTB6 97 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 RAET1LQ5VY80 246 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 NCR3LG1Q68D85 454 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 RHBDD1Q8TEB9 315 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 HOXB13Q92826 284 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 DDIT4LQ96D03 193 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CYYR1Q96J86 154 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 NOL4LQ96MY1 436 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 HDHD3Q9BSH5 251 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 METTL9Q9H1A3 318 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 COL4A3Q01955 1670 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 SFTPCP11686 197 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 HLA-DOBP13765 273 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 NKX2-1P43699 371 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CD81P60033 236 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 EGR4Q05215 589 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 DMWDQ09019 674 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 MGAT2Q10469 447 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 TESK1Q15569 626 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 MPV17LQ2QL34 196 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 VAX1Q5SQQ9 334 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 BRICD5Q6PL45 260 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 RNF144BQ7Z419 303 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 KMT5CQ86Y97 462 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 RAB24Q969Q5 203 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 PTX4Q96A99 478 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 TMEM18Q96B42 140 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 C8orf44Q96CB5 159 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 PRRG4Q9BZD6 226 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 WFDC1Q9HC57 220 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 A0A0U1RQK1 487 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 FRG2CA6NGY1 282 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 MSTNO14793 375 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 HBE1P02100 147 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CT45A8P0DMV1 189 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CT45A9P0DMV2 189 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 RRADP55042 308 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 FGF8P55075 233 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 BIDP55957 195 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CT45A2Q5DJT8 189 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 PRAMEF20Q5VT98 475 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 UBALD2Q8IYN6 164 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 ZNF664Q8N3J9 261 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 DEFB123Q8N688 67 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 SLC26A10Q8NG04 563 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 OR5C1Q8NGR4 320 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 RPUSD4Q96CM3 377 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CCNL2Q96S94 520 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 STRADBQ9C0K7 418 aa6.51□□□□□ -1.37
SYNPO2-203ENST00000434046 CACNA1EQ15878 2313 aa6.5□□□□□ -1.37
SYNPO2-203ENST00000434046 RP1P56715 2156 aa6.5□□□□□ -1.37
SYNPO2-203ENST00000434046 MED12Q93074 2177 aa6.5□□□□□ -1.37
SYNPO2-203ENST00000434046 WIPF3A6NGB9 483 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms