RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 HPP00738 406 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 GLAP06280 429 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 CHRM2P08172 466 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 CTSSP25774 331 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 BLOC1S1P78537 153 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 FAM189A2Q15884 450 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 CLVS2Q5SYC1 327 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 C11orf87Q6NUJ2 197 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 CLEC18BQ6UXF7 455 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 TPRX1Q8N7U7 411 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 SPTSSAQ969W0 71 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 INTS12Q96CB8 462 aaKnown RBP7.25□□□□□ -1.25
CD44-208ENST00000428726 PECRQ9BY49 303 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 GPR35Q9HC97 309 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 UFSP2Q9NUQ7 469 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 TMEM38BQ9NVV0 291 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 SLC2A8Q9NY64 477 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 AK3Q9UIJ7 227 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 OR6C65A6NJZ3 312 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 DNASE2O00115 360 aaPredicted RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 ABCD4O14678 606 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 IGHEP01854 428 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 FGF2P09038 288 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 CA6P23280 308 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 MPZP25189 248 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 MPGP29372 298 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 SSPNQ14714 243 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 TRIP6Q15654 476 aaKnown RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 C10orf128Q5T292 105 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 VHLLQ6RSH7 139 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 SLC22A25Q6T423 547 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 PUSL1Q8N0Z8 303 aaKnown RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 KCNG3Q8TAE7 436 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 MARVELD3Q96A59 401 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 NTNG2Q96CW9 530 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 TAAR9Q96RI9 348 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 NKX6-2Q9C056 277 aaPredicted RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 MAGT1Q9H0U3 335 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 SH2D2AQ9NP31 389 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 USF3Q68DE3 2245 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 CSMD2Q7Z408 3487 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 H0YIZ8 118 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 RHBDL1O75783 438 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 ACTL6AO96019 429 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 DAOP14920 347 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 TBPP20226 339 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 KCNJ3P48549 501 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 ZNF133P52736 654 aaPredicted RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 SOX8P57073 446 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 RAB32Q13637 225 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 OR2A2Q6IF42 318 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 HAGHLQ6PII5 290 aaPredicted RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 INO80EQ8NBZ0 244 aaPredicted RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 OR10AD1Q8NGE0 317 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 TMEM54Q969K7 222 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 TMEM230Q96A57 120 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 BSCL2Q96G97 398 aaPredicted RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 TLNRD1Q9H1K6 362 aa7.24□□□□□ -1.25
CD44-208ENST00000428726 RCL1Q9Y2P8 373 aaKnown RBP7.24□□□□□ -1.25
CD44-208ENST00000428726 ZNF318Q5VUA4 2279 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 RNF222A6NCQ9 220 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 GJE1A6NN92 205 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 KRBOX1C9JBD0 128 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 LINC01387J3KSC0 135 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 SERPINA7P05543 415 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 GRPP07492 148 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 ZNF16P17020 682 aaPredicted RBP7.23□□□□□ -1.25
CD44-208ENST00000428726 SRD5A2P31213 254 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 CEBPGP53567 150 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 DEFB109BQ30KR1 87 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 OR2B11Q5JQS5 317 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 PDSS1Q5T2R2 415 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 JMJD6Q6NYC1 403 aaPredicted RBP7.23□□□□□ -1.25
CD44-208ENST00000428726 ZNF611Q8N823 705 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 ZDHHC22Q8N966 263 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 FDCSPQ8NFU4 85 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 THAP6Q8TBB0 222 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 SECTM1Q8WVN6 248 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 URM1Q9BTM9 101 aaKnown RBP7.23□□□□□ -1.25
CD44-208ENST00000428726 BCL2L14Q9BZR8 327 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 OR2H1Q9GZK4 316 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 PARD6AQ9NPB6 346 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 OR14J1Q9UGF5 321 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 FOXD3Q9UJU5 478 aaPredicted RBP7.23□□□□□ -1.25
CD44-208ENST00000428726 RFPL4AA6NLU0 287 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 RFPL4AL1F8VTS6 287 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 UBBP0CG47 229 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 BCL3P20749 454 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 CNR1P21554 472 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 NME2P22392 152 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 LINC00205P59089 165 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 FAM3AP98173 230 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 EIF3IQ13347 325 aaKnown RBP7.23□□□□□ -1.25
CD44-208ENST00000428726 LPCAT3Q6P1A2 487 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 ZNF826PQ6ZT77 177 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 FOXL2NBQ6ZUU3 175 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 TERB2Q8NHR7 220 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 AIFM2Q9BRQ8 373 aa7.23□□□□□ -1.25
CD44-208ENST00000428726 B4E171 279 aa7.22□□□□□ -1.25
CD44-208ENST00000428726 H3BP45 60 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms