RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 KIRREL1Q96J84 757 aa9.86□□□□□ -0.83
SNX13-202ENST00000409604 MAGT1Q9H0U3 335 aa9.86□□□□□ -0.83
SNX13-202ENST00000409604 DUX4Q9UBX2 424 aa9.86□□□□□ -0.83
SNX13-202ENST00000409604 H3BP45 60 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 NDUFB3O43676 98 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 ACKR3P25106 362 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 GFRA1P56159 465 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 KRBOX4Q5JUW0 171 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 CCDC71LQ8N9Z2 235 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 CHODLQ9H9P2 273 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 AMDHD2Q9Y303 409 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 MSTNO14793 375 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 AGPAT2O15120 278 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 IFI6P09912 130 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 APELAP0DMC3 54 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 REG1BP48304 166 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 LINC00303Q3SY05 128 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 C1QL2Q7Z5L3 287 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 LYG1Q8N1E2 194 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 PPP1R14BQ96C90 147 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 PGLYRP3Q96LB9 341 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 FYTTD1Q96QD9 318 aaKnown RBP9.85□□□□□ -0.83
SNX13-202ENST00000409604 C12orf4Q9NQ89 552 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 BPNT1O95861 308 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 MRPS10P82664 201 aaKnown RBP9.85□□□□□ -0.83
SNX13-202ENST00000409604 AGAP6Q5VW22 663 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 NMNAT2Q9BZQ4 307 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.85□□□□□ -0.832e-7■■■■■ 54.7
SNX13-202ENST00000409604 PSG11Q9UQ72 335 aa9.85□□□□□ -0.83
SNX13-202ENST00000409604 IGHV3OR16-10A0A075B7F0 116 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 POM121CA8CG34 1229 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 H0YL77 283 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 LANCL1O43813 399 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 ADRA2CP18825 462 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 PLA2G7Q13093 441 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 MPPED2Q15777 294 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 RIPPLY2Q5TAB7 128 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 SHEQ5VZ18 495 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 BTNL3Q6UXE8 466 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 PAQR4Q8N4S7 273 aaPredicted RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 OR2AK2Q8NG84 335 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 LEAP2Q969E1 77 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 SRRQ9GZT4 340 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 C20orf85Q9H1P6 137 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 NECAP2Q9NVZ3 263 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 LSM2Q9Y333 95 aaKnown RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 H3BUI4 141 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 KRASP01116 189 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 MPV17P39210 176 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 MMP15P51511 669 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 ZNF133P52736 654 aaPredicted RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 SPINK9Q5DT21 86 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 SLC25A30Q5SVS4 291 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 TMEM246Q9BRR3 403 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 PARP12Q9H0J9 701 aaKnown RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 SPACA1Q9HBV2 294 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 CYSLTR2Q9NS75 346 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 CA10Q9NS85 328 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 PURGQ9UJV8 347 aaKnown RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 FOXJ3Q9UPW0 622 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 NUBP2Q9Y5Y2 271 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 TRIM64A6NGJ6 449 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 XRCC3O43542 346 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 FBXO24O75426 580 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 RHBDL1O75783 438 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 CEACAM6P40199 344 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 KIR2DL2P43627 348 aaPredicted RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 LIMK1P53667 647 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 PDZK1IP1Q13113 114 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 METTL11BQ5VVY1 283 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 Q6ZS92 163 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 PCGF1Q9BSM1 259 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 FAM206AQ9NX38 181 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 FREM2Q5SZK8 3169 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 OR14I1A6ND48 311 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 SNAPC5O75971 98 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 HOXA4Q00056 320 aaPredicted RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 NAAAQ02083 359 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 CLINT1Q14677 625 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 IAH1Q2TAA2 248 aaPredicted RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 C22orf15Q8WYQ4 148 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 MRPL13Q9BYD1 178 aaKnown RBP9.84□□□□□ -0.83
SNX13-202ENST00000409604 RAB1BQ9H0U4 201 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 MIXL1Q9H2W2 232 aa9.84□□□□□ -0.83
SNX13-202ENST00000409604 REV3LO60673 3130 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 ZNF724A8MTY0 619 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 SC5DO75845 299 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 CNIH1O95406 144 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 IFNA4P05014 189 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 HIST1H1DP16402 221 aaKnown RBP9.83□□□□□ -0.84
SNX13-202ENST00000409604 SERPINF1P36955 418 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 GPR12P47775 334 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 FAM3AP98173 230 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 SLC36A1Q7Z2H8 476 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 LRP11Q86VZ4 500 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 TMEM123Q8N131 208 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 TMEM171Q8WVE6 324 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 CHST5Q9GZS9 411 aa9.83□□□□□ -0.84
SNX13-202ENST00000409604 RANBP3Q9H6Z4 567 aaPredicted RBP9.83□□□□□ -0.84
SNX13-202ENST00000409604 IL36RNQ9UBH0 155 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms