RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 MEGF9Q9H1U4 602 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 PNLIPP16233 465 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 CCR2P41597 374 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 DYNLT3P51808 116 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 TCL1AP56279 114 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 GPM6BQ13491 265 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 TCTN1Q2MV58 587 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 Q6ZVH6 145 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 BEND2Q8NDZ0 799 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 PHOSPHO2Q8TCD6 241 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 WBP1Q96G27 269 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 EMC6Q9BV81 110 aa12.18□□□□□ -0.46
RUNX3-203ENST00000399916 MRPS18BQ9Y676 258 aaKnown RBP12.18□□□□□ -0.46
RUNX3-203ENST00000399916 DOCK9Q9BZ29 2069 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 VSTM2BA6NLU5 285 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 M0R1X1 148 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 CD5P06127 495 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 CD99P14209 185 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 SUCLG1P53597 346 aaKnown RBP12.17□□□□□ -0.46
RUNX3-203ENST00000399916 KLF3P57682 345 aaPredicted RBP12.17□□□□□ -0.46
RUNX3-203ENST00000399916 POU3F1Q03052 451 aaPredicted RBP12.17□□□□□ -0.46
RUNX3-203ENST00000399916 ZNF154Q13106 437 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 WBP2NLQ6ICG8 309 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 NKAIN3Q8N8D7 197 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 OR7C2O60412 319 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 CA3P07451 260 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 PVRP15151 417 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 DCDP81605 110 aaKnown RBP12.17□□□□□ -0.46
RUNX3-203ENST00000399916 ABHD17CQ6PCB6 329 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 Q8NFD4 153 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 LRIT1Q9P2V4 623 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 MTCH2Q9Y6C9 303 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 LINC01553A4QN01 128 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 P2RY1P47900 373 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 EMDP50402 254 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 MTCP1P56278 107 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 CCL20P78556 96 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 ADGRG7Q96K78 797 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 AQP10Q96PS8 301 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 VDAC3Q9Y277 283 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 ZNF835Q9Y2P0 537 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 KLHDC2Q9Y2U9 406 aa12.17□□□□□ -0.46
RUNX3-203ENST00000399916 GAGE10A6NGK3 116 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 ZNF264O43296 627 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 ADH5P11766 374 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 RPL18Q07020 188 aaKnown RBP12.16□□□□□ -0.46
RUNX3-203ENST00000399916 KIAA1644Q3SXP7 199 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 SLC39A11Q8N1S5 342 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
RUNX3-203ENST00000399916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
RUNX3-203ENST00000399916 ERRFI1Q9UJM3 462 aaPredicted RBP12.16□□□□□ -0.46
RUNX3-203ENST00000399916 HCFC2Q9Y5Z7 792 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 AHCTF1Q8WYP5 2266 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 HBG1P69891 147 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 HBG2P69892 147 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 RTL10Q7L3V2 364 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 OR1N1Q8NGS0 311 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 PARLQ9H300 379 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 KIAA1456Q9P272 454 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 UQCR10Q9UDW1 63 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 HDGFL3Q9Y3E1 203 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 AGBL4Q5VU57 503 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 STUMQ69YW2 141 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 ERN2Q76MJ5 926 aaKnown RBP12.16□□□□□ -0.46
RUNX3-203ENST00000399916 OR2I1PQ8NGU4 316 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 PSMF1Q92530 271 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 MS4A6EQ96DS6 147 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 COPS7AQ9UBW8 275 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 WIPI2Q9Y4P8 454 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 RFNGQ9Y644 331 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 GTF3C1Q12789 2109 aa12.16□□□□□ -0.46
RUNX3-203ENST00000399916 A8MVM7 634 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 NRG2O14511 850 aaPredicted RBP12.15□□□□□ -0.46
RUNX3-203ENST00000399916 GDF9O60383 454 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 DANCRP0C864 163 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 VIPR2P41587 438 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 COMPP49747 757 aaPredicted RBP12.15□□□□□ -0.46
RUNX3-203ENST00000399916 FBLN7Q53RD9 439 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 MVB12AQ96EY5 273 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 PLEKHF2Q9H8W4 249 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
RUNX3-203ENST00000399916 ASXL3Q9C0F0 2248 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 DUXBA0A1W2PPF3 345 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 CRYAAP02489 173 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 IER3P46695 156 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 RIPPLY2Q5TAB7 128 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 RNASEKQ6P5S7 137 aaKnown RBP12.15□□□□□ -0.46
RUNX3-203ENST00000399916 OR2AE1Q8NHA4 323 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 ZNF160Q9HCG1 818 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 ANKRD10Q9NXR5 420 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 NAT8Q9UHE5 227 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 FIGNL2A6NMB9 653 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 J3QR89 54 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 TLX3O43711 291 aaPredicted RBP12.15□□□□□ -0.46
RUNX3-203ENST00000399916 TSPAN7P41732 249 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 RRADP55042 308 aa12.15□□□□□ -0.46
RUNX3-203ENST00000399916 EWSR1Q01844 656 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms