RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 AQP11Q8NBQ7 271 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 OR5M8Q8NGP6 311 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 CREB3L1Q96BA8 519 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 OTULINQ96BN8 352 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 RAX2Q96IS3 184 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 NSMCE2Q96MF7 247 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 TEAD3Q99594 435 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 PBOV1Q9GZY1 135 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 OR51V1Q9H2C8 321 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 NUFIP1Q9UHK0 495 aaKnown RBP7.41□□□□□ -1.22
NEDD9-203ENST00000397378 UBE2J1Q9Y385 318 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-203ENST00000397378 MOB4Q9Y3A3 225 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 HSPE1-MOB4S4R3N1 261 aa7.41□□□□□ -1.22
NEDD9-203ENST00000397378 OOSP1A8MZH6 123 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 PRR23D1E9PI22 279 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-203ENST00000397378 PRODHO43272 600 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 SNRNP70P08621 437 aaKnown RBP7.4□□□□□ -1.22
NEDD9-203ENST00000397378 PRR23D2P0DMB1 279 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-203ENST00000397378 PEX2P28328 305 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 ERP29P30040 261 aaKnown RBP7.4□□□□□ -1.22
NEDD9-203ENST00000397378 SLC35B1P78383 322 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 EDDM3AQ14507 147 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 SLX4IPQ5VYV7 408 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 CCDC144NLQ6NUI1 221 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 CD300LDQ6UXZ3 194 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 HEPN1Q6WQI6 88 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 Q6ZSR3 168 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 ASRGL1Q7L266 308 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 ANGPTL5Q86XS5 388 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 THNSL2Q86YJ6 484 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 NOL4LQ96MY1 436 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-203ENST00000397378 GPR173Q9NS66 373 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 SCOCQ9UIL1 159 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 LAMP5Q9UJQ1 280 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 ALMS1Q8TCU4 4167 aa7.4□□□□□ -1.22
NEDD9-203ENST00000397378 FAM90A18PA6NE21 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 ARRDC5A6NEK1 342 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A16PA6NEW6 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A20PA6NIJ5 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A9PA6NNJ1 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 DHRS7CA6NNS2 312 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A12PA8MX19 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A5PA8MXJ8 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 F8VVB4 439 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 F8VWA3 439 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 LY6LH3BQJ8 138 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 BUB1B-PAK6H3BSN5 160 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 MGST3O14880 152 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 ARPC2O15144 300 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 ZNF254O75437 659 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 E2F6O75461 281 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 IGHA1P01876 353 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 TTRP02766 147 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 HCKP08631 526 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A15PP0C7V4 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A13PP0C7W8 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A14PP0C7W9 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM90A24PP0C7X0 464 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 FAM106CPP0CH98 169 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 MNDAP41218 407 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 MAGEA2P43356 314 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 ROM1Q03395 351 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 GRK1Q15835 563 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 MICAQ29983 383 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 HLA-DRB5Q30154 266 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 ZNF260Q3ZCT1 412 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 SLC35D3Q5M8T2 416 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 TPTE2P1Q5T6R2 138 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 BAIAP2L2Q6UXY1 529 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 TPRX1Q8N7U7 411 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 OR52N4Q8NGI2 321 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 TEX47Q8TBZ9 253 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 CMTM5Q96DZ9 223 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 CEP19Q96LK0 163 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 MROQ9BYG7 248 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 YIPF3Q9GZM5 350 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 TAS2R1Q9NYW7 299 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 MTCH1Q9NZJ7 389 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 V9GYS6 101 aa7.39□□□□□ -1.23
NEDD9-203ENST00000397378 KIAA1109Q2LD37 5005 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 A0A087X0M5 115 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 A0A1B0GX30 115 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 SERPINE3A8MV23 424 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 LDLRAD4O15165 306 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 FGF16O43320 207 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 PSPNO60542 156 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 SRSF10O75494 262 aaKnown RBP7.38□□□□□ -1.23
NEDD9-203ENST00000397378 HAND1O96004 215 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 IGHG2P01859 326 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 SLC2A5P22732 501 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 CDK2P24941 298 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 P2RX3P56373 397 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 ZNF91Q05481 1191 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 PPP1R8Q12972 351 aaKnown RBP7.38□□□□□ -1.23
NEDD9-203ENST00000397378 KIR2DS1Q14954 304 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 ZNF829Q3KNS6 432 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-203ENST00000397378 PRAMEF5Q5TYX0 476 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 TEX38Q6PEX7 206 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms