RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 C11orf87Q6NUJ2 197 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 TOMM20LQ6UXN7 152 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 ZNF485Q8NCK3 441 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 MGPP08493 103 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 HNRNPA3P51991 378 aaKnown RBP13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 TMEM128Q5BJH2 165 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 OR13G1Q8NGZ3 307 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 RASL11BQ9BPW5 248 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 MBD1Q9UIS9 605 aaPredicted RBP13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 A0A1B0GUH1 482 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 IGHA1P01876 353 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 IGHA2P01877 340 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 CSF2RBP32927 897 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 SLC35E4Q6ICL7 350 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 RAB1CQ92928 201 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 TMEM204Q9BSN7 226 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 GEMIN2O14893 280 aaKnown RBP13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 RAB32Q13637 225 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 RNPS1Q15287 305 aaKnown RBP13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 ZNF66Q6ZN08 573 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 FLRT3Q9NZU0 649 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 SLC17A2O00624 439 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 ANKRD34CP0C6C1 535 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 CALHM3Q86XJ0 350 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 CD1BP29016 333 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 GNG4P50150 75 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 NSUN5P2Q63ZY6 315 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 ABHD3Q8WU67 409 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 C10orf90Q96M02 699 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 FGF20Q9NP95 211 aaPredicted RBP13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 SIRT3Q9NTG7 399 aaPredicted RBP13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 DHRS3O75911 302 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 ZFPL1O95159 310 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 OR4A8P0C604 315 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 Q71RC1 249 aaPredicted RBP13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 C17orf47Q8NEP4 570 aa13.04□□□□□ -0.32
NOTCH4-201ENST00000375023 ARG1P05089 322 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 CTLA4P16410 223 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 ABI3BPQ7Z7G0 1075 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 NHLRC2Q8NBF2 726 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 PLPP3O14495 311 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 RNASE1P07998 156 aaKnown RBP13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 HTR1DP28221 377 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 SELENOPP49908 381 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 DUSP18Q8NEJ0 188 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 PRSS3P2Q8NHM4 247 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 IL22RA2Q969J5 263 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 MAP6Q96JE9 813 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 C12orf57Q99622 126 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 SRD5A3Q9H8P0 318 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 ZMAT5Q9UDW3 170 aaKnown RBP13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 MAST2Q6P0Q8 1798 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 TGOLN2O43493 480 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 ZNF737O75373 536 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 HIST1H1DP16402 221 aaKnown RBP13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 FPR2P25090 351 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 LHX9Q9NQ69 397 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 RAXQ9Y2V3 346 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 SCN9AQ15858 1988 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 SNCGO76070 127 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 NPY1RP25929 384 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 DYNLT3P51808 116 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 FUT7Q11130 342 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 MUC20Q8N307 709 aaPredicted RBP13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 SSMEM1Q8WWF3 244 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 GPR137Q96N19 417 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 TMEFF2Q9UIK5 374 aaPredicted RBP13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 TMSB15BA0A087X1C1 80 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 PTBP1P26599 531 aaKnown RBP eCLIP13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 RELBQ01201 579 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 OR1K1Q8NGR3 316 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 TINAGQ9UJW2 476 aa13.03□□□□□ -0.32
NOTCH4-201ENST00000375023 GLULP15104 373 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 GUK1Q16774 197 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 RRN3P1Q2M238 152 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 SPRED2Q7Z698 418 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 OR8B12Q8NGG6 310 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 TMEM18Q96B42 140 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 TOX3O15405 576 aaPredicted RBP13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 IL11RAQ14626 422 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 C11orf44Q8N8P7 122 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 MRGPRX3Q96LB0 322 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 ZFP64Q9NPA5 681 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 PRR19A6NJB7 356 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 CDIPTO14735 213 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 SP1P08047 785 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 FAM87AP0C7U9 286 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 VAMP8Q9BV40 100 aa13.02□□□□□ -0.32
NOTCH4-201ENST00000375023 MMP15P51511 669 aa13.02□□□□□ -0.33
NOTCH4-201ENST00000375023 MVDP53602 400 aa13.02□□□□□ -0.33
NOTCH4-201ENST00000375023 PRRX1P54821 245 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms