RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 RIMS4Q9H426 269 aaPredicted RBP9.39□□□□□ -0.91
MUC4-201ENST00000308466 KCNS2Q9ULS6 477 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 SHISA7A6NL88 538 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 ZNF705FA8MVS1 300 aaPredicted RBP9.39□□□□□ -0.91
MUC4-201ENST00000308466 TRAPPC2LH3BP13 241 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 SCAF4O95104 1147 aaKnown RBP9.39□□□□□ -0.91
MUC4-201ENST00000308466 CNOT4O95628 575 aaKnown RBP9.39□□□□□ -0.91
MUC4-201ENST00000308466 IGHV2-70P01814 119 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 ZNF705DP0CH99 300 aaPredicted RBP9.39□□□□□ -0.91
MUC4-201ENST00000308466 ZNF705BP0CI00 300 aaPredicted RBP9.39□□□□□ -0.91
MUC4-201ENST00000308466 LIFP15018 202 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 RPA2P15927 270 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 RAB32Q13637 225 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 SLC25A47Q6Q0C1 308 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 SKA3Q8IX90 412 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 HSD17B11Q8NBQ5 300 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 KLF2Q9Y5W3 355 aaPredicted RBP9.39□□□□□ -0.91
MUC4-201ENST00000308466 TNFSF12O43508 249 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 PIGPP57054 158 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 Q5PR19 223 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 CLEC18BQ6UXF7 455 aa9.39□□□□□ -0.91
MUC4-201ENST00000308466 DNAH14Q0VDD8 3507 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 LOC390937A0A1W2PQ73 354 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 XRCC2O43543 280 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 HPP00738 406 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 TK1P04183 234 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 MMP7P09237 267 aaPredicted RBP9.38□□□□□ -0.91
MUC4-201ENST00000308466 APLNRP35414 380 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 ZNF133P52736 654 aaPredicted RBP9.38□□□□□ -0.91
MUC4-201ENST00000308466 LSM6P62312 80 aaKnown RBP9.38□□□□□ -0.91
MUC4-201ENST00000308466 ARG2P78540 354 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 HABP2Q14520 560 aaPredicted RBP9.38□□□□□ -0.91
MUC4-201ENST00000308466 PNLIPRP3Q17RR3 467 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 CCDC71LQ8N9Z2 235 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 OR6K3Q8NGY3 331 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 ABHD3Q8WU67 409 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 DEFB127Q9H1M4 99 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 NECAP2Q9NVZ3 263 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 B3GAT1Q9P2W7 334 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 SERPINE3A8MV23 424 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 ZNF587BE7ETH6 402 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 IGHMP01871 453 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 HLA-HP01893 362 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 SFTA3P0C7M3 94 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 RAC3P60763 192 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 DRAM2Q6UX65 266 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 KCNRGQ8N5I3 272 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 MITD1Q8WV92 249 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 C2orf50Q96LR7 162 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 ELOVL1Q9BW60 279 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 ZNF319Q9P2F9 582 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 PCNX3Q9H6A9 2034 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 ADAM10O14672 748 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 LDLRAD4O15165 306 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 EFSO43281 561 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 GP1BAP07359 652 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 PCOLCEQ15113 449 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 RTN4IP1Q8WWV3 396 aaPredicted RBP9.38□□□□□ -0.91
MUC4-201ENST00000308466 DYRK2Q92630 601 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 PECRQ9BY49 303 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 TCFL5Q9UL49 500 aa9.38□□□□□ -0.91
MUC4-201ENST00000308466 COLQQ9Y215 455 aaPredicted RBP9.38□□□□□ -0.91
MUC4-201ENST00000308466 ANKRD30BLA7E2S9 258 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 HS3ST1O14792 307 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 CRHP06850 196 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 UBE2NP61088 152 aaKnown RBP9.37□□□□□ -0.91
MUC4-201ENST00000308466 TSPO2Q5TGU0 170 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 RNF144BQ7Z419 303 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 OR5AS1Q8N127 324 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 OR5AP2Q8NGF4 316 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 AQP3Q92482 292 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 RDH5Q92781 318 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 TAF9BQ9HBM6 251 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 SPACA1Q9HBV2 294 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 PILRBQ9UKJ0 227 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 SLC34A2O95436 690 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 SFT2D2O95562 160 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 OR13C7P0DN81 318 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 ZNF468Q5VIY5 522 aaPredicted RBP9.37□□□□□ -0.91
MUC4-201ENST00000308466 OSR2Q8N2R0 312 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 OR10S1Q8NGN2 331 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 PTX4Q96A99 478 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 ZNF837Q96EG3 531 aaPredicted RBP9.37□□□□□ -0.91
MUC4-201ENST00000308466 KCNJ16Q9NPI9 418 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 UQCC1Q9NVA1 299 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 IGHV1-45A0A0A0MS14 117 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 K7ESF4 209 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 LRP3O75074 770 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 IGFBP3P17936 291 aaPredicted RBP9.37□□□□□ -0.91
MUC4-201ENST00000308466 RAB4AP20338 218 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 FPR2P25090 351 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 SRD5A2P31213 254 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 ARF1P84077 181 aaKnown RBP9.37□□□□□ -0.91
MUC4-201ENST00000308466 C1orf210Q8IVY1 113 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 PSMF1Q92530 271 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 APH1AQ96BI3 265 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 RHOFQ9HBH0 211 aa9.37□□□□□ -0.91
MUC4-201ENST00000308466 CHCHD2Q9Y6H1 151 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms