RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SP1P08047 785 aa15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 RPL24P83731 157 aaKnown RBP15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 MUC20Q8N307 709 aaPredicted RBP15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 OR13G1Q8NGZ3 307 aa15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 NARFLQ9H6Q4 476 aa15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 POU2F2P09086 479 aa15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 NHLRC1Q6VVB1 395 aa15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 OR1L3Q8NH93 324 aa15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 FOXB1Q99853 325 aa15.59■□□□□ 0.09
NOTCH3-201ENST00000263388 C3orf85A0A1B0GTC6 90 aa15.58■□□□□ 0.09
NOTCH3-201ENST00000263388 PPP1R1AQ13522 171 aa15.58■□□□□ 0.09
NOTCH3-201ENST00000263388 ATP6V1FQ16864 119 aa15.58■□□□□ 0.09
NOTCH3-201ENST00000263388 RBP4P02753 201 aa15.58■□□□□ 0.09
NOTCH3-201ENST00000263388 RAE1P78406 368 aaKnown RBP15.58■□□□□ 0.09
NOTCH3-201ENST00000263388 IGLV3-16A0A075B6K0 115 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 OR1L4Q8NGR5 311 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 LRRC61Q9BV99 259 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 A0A087X0M5 115 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 A0A1B0GX30 115 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 F5H697 171 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 CLDN34H7C241 214 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 SEMA7AO75326 666 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 ALKBH6Q3KRA9 238 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 JMJD6Q6NYC1 403 aaPredicted RBP15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 MRGPREQ86SM8 312 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 OR8D4Q8NGM9 314 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 OR4C3Q8NH37 302 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 KCNE1BA0A087WTH5 132 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 MYPOPQ86VE0 399 aaPredicted RBP15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 DYRK2Q92630 601 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 LOC102724200A0A096LPH7 203 aaPredicted RBP15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 CDC14BO60729 498 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 OR5A2Q8NGI9 324 aa15.58■□□□□ 0.08
NOTCH3-201ENST00000263388 ONECUT2O95948 504 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 FAM87AP0C7U9 286 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 SP6Q3SY56 376 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 Q56UQ5 140 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 IL36GQ9NZH8 169 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 EP300Q09472 2414 aaPredicted RBP15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 RPLP1P05386 114 aaKnown RBP15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 LILRB1Q8NHL6 650 aaPredicted RBP15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 IGHA1P01876 353 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 IGHA2P01877 340 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 SLC25A5P05141 298 aaKnown RBP15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 OR5AC1P0C628 307 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 GAL3ST2Q9H3Q3 398 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 MMP24Q9Y5R2 645 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 WNT1P04628 370 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 SBK3P0C264 359 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 PRRX1P54821 245 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 TRMT61AQ96FX7 289 aaKnown RBP15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 SPTAN1Q13813 2472 aaKnown RBP15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 DUXBA0A1W2PPF3 345 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 INHBBP09529 407 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 DEFB109BQ30KR1 87 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 TRILQ7L0X0 811 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 TUSC5Q8IXB3 177 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 MCHR2Q969V1 340 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 C20orf141Q9NUB4 165 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 TMEM30AQ9NV96 361 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF831Q5JPB2 1677 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 PRICKLE4Q2TBC4 344 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 TMEM37Q8WXS4 190 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 CLEC1BQ9P126 229 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 BRWD3Q6RI45 1802 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 SPRY3O43610 288 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 NKX2-2O95096 273 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 LIMK1P53667 647 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 LSM11P83369 360 aaKnown RBP eCLIP15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 FAM210BQ96KR6 192 aa15.57■□□□□ 0.08
NOTCH3-201ENST00000263388 MBPP02686 304 aaPredicted RBP15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 C20orf196Q8IYI0 205 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 NPEPL1Q8NDH3 523 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 CACNA1BQ00975 2339 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 SPEM1Q8N4L4 309 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 CCL7P80098 99 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 DNAJB12Q9NXW2 375 aaKnown RBP15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 NGFP01138 241 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 HFEQ30201 348 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 FGF14Q92915 247 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 OR2T8A6NH00 312 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 SHISA7A6NL88 538 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 SFT2D2O95562 160 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 BCL3P20749 454 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 PCBP3P57721 371 aaKnown RBP15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 GRAMD2BQ96HH9 432 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 NEURL2Q9BR09 285 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 RPL29P47914 159 aaKnown RBP15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 SMAGPQ0VAQ4 97 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 TRA2AQ13595 282 aaKnown RBP eCLIP15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 GFRALQ6UXV0 394 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 OR5B21A6NL26 309 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF385DQ9H6B1 395 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 CACNG5Q9UF02 275 aa15.56■□□□□ 0.08
NOTCH3-201ENST00000263388 TBX19O60806 448 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 OR1C1Q15619 314 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF766Q5HY98 468 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 OR6C3Q9NZP0 311 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ERRFI1Q9UJM3 462 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms