RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 ZNF714Q96N38 554 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 MAGIXQ9H6Y5 334 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 IKZF2Q9UKS7 526 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 V9GYS6 101 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 PSPNO60542 156 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 SNU13P55769 128 aaKnown RBP10.25□□□□□ -0.77
LINC00339-206ENST00000634451 OR12D2P58182 307 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 ROM1Q03395 351 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 CD69Q07108 199 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 CLVS2Q5SYC1 327 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 C16orf89Q6UX73 402 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 SSX6Q7RTT6 188 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 MRPL41Q8IXM3 137 aaKnown RBP10.25□□□□□ -0.77
LINC00339-206ENST00000634451 ADGRG5Q8IZF4 528 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 YIPF3Q9GZM5 350 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 PITPNC1Q9UKF7 332 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 TSSC4Q9Y5U2 329 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-206ENST00000634451 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 RYR2Q92736 4967 aa10.25□□□□□ -0.77
LINC00339-206ENST00000634451 DYNC2H1Q8NCM8 4307 aaKnown RBP10.24□□□□□ -0.77
LINC00339-206ENST00000634451 PRKYO43930 277 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 CHRM2P08172 466 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 GYS2P54840 703 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 UBE2V2Q15819 145 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 SLC35D3Q5M8T2 416 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 GDPD3Q7L5L3 318 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 RNF144BQ7Z419 303 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 ZNF329Q86UD4 541 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 DHFR2Q86XF0 187 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 ZNF679Q8IYX0 411 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 OR8H2Q8N162 312 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 CCDC124Q96CT7 223 aaKnown RBP10.24□□□□□ -0.77
LINC00339-206ENST00000634451 RCC1LQ96I51 464 aaKnown RBP10.24□□□□□ -0.77
LINC00339-206ENST00000634451 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 DUX3Q96PT4 197 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 SLC25A33Q9BSK2 321 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 CHID1Q9BWS9 393 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 MROQ9BYG7 248 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 TMEM133Q9H2Q1 129 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 RBFOX1Q9NWB1 397 aaKnown RBP10.24□□□□□ -0.77
LINC00339-206ENST00000634451 TVP23BQ9NYZ1 205 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 MRM2Q9UI43 246 aaKnown RBP10.24□□□□□ -0.77
LINC00339-206ENST00000634451 POLDIP2Q9Y2S7 368 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 SESN1Q9Y6P5 492 aa10.24□□□□□ -0.77
LINC00339-206ENST00000634451 HUWE1Q7Z6Z7 4374 aaKnown RBP10.24□□□□□ -0.77
LINC00339-206ENST00000634451 LOC110117498-PIK3R3F6TDL0 507 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 CST1P01037 141 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 OSMP13725 252 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 ATP6V1B1P15313 513 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 NPBWR2P48146 333 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 RIDAP52758 137 aaKnown RBP10.23□□□□□ -0.77
LINC00339-206ENST00000634451 CXCR4P61073 352 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 IL24Q13007 206 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 ZNF829Q3KNS6 432 aaPredicted RBP10.23□□□□□ -0.77
LINC00339-206ENST00000634451 FAM98BQ52LJ0 330 aaKnown RBP10.23□□□□□ -0.77
LINC00339-206ENST00000634451 C9orf152Q5JTZ5 239 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 BCL2L15Q5TBC7 163 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 MINOS1Q5TGZ0 78 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 SLC25A26Q70HW3 274 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 ELMOD2Q8IZ81 293 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 CEP19Q96LK0 163 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 ZNF649Q9BS31 505 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 CLEC7AQ9BXN2 247 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 OR52A1Q9UKL2 312 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 R4GMQ9 66 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 MINOS1-NBL1R4GNA1 71 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 TENM2Q9NT68 2774 aa10.23□□□□□ -0.77
LINC00339-206ENST00000634451 ARRDC5A6NEK1 342 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 ACOD1A6NK06 481 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 B2RBV5 119 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 DLGAP1O14490 977 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 RPP14O95059 124 aaKnown RBP10.22□□□□□ -0.77
LINC00339-206ENST00000634451 APOL3O95236 402 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 HAND1O96004 215 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 RBP4P02753 201 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 HMGN1P05114 100 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 SNRNP70P08621 437 aaKnown RBP10.22□□□□□ -0.77
LINC00339-206ENST00000634451 GABRR1P24046 479 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 OR3A1P47881 315 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 GRK1Q15835 563 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 SNAPC1Q16533 368 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 KCTD18Q6PI47 426 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-206ENST00000634451 DEGS2Q6QHC5 323 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 ZNF322Q6U7Q0 402 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-206ENST00000634451 C8orf86Q6ZUL3 223 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 DTX3Q8N9I9 347 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 CANT1Q8WVQ1 401 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 RBMXL1Q96E39 390 aaKnown RBP10.22□□□□□ -0.77
LINC00339-206ENST00000634451 NOL4LQ96MY1 436 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-206ENST00000634451 TBX5Q99593 518 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 PKIBQ9C010 78 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 ZNF286AQ9HBT8 521 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 SLC25A19Q9HC21 320 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 ING3Q9NXR8 418 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 GAR1Q9NY12 217 aaKnown RBP10.22□□□□□ -0.77
LINC00339-206ENST00000634451 LINC00527Q9UJ94 153 aa10.22□□□□□ -0.77
LINC00339-206ENST00000634451 SACSQ9NZJ4 4579 aa10.21□□□□□ -0.77
LINC00339-206ENST00000634451 hADV38S2A0JD32 116 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms