RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 HIST1H2BOP23527 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 ATP6V0CP27449 155 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 CDAP32320 146 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H2BBP33778 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H2BDP58876 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 RND3P61587 244 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 PKIAP61925 76 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H2BCP62807 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H3AP68431 136 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 MFAP5Q13361 173 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 OR8B8Q15620 311 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST2H2BEQ16778 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 PLPPR5Q32ZL2 321 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.57□□□□□ -0.24
GPN1-212ENST00000616939 OGFOD3Q6PK18 319 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 FAM185AQ8N0U4 392 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 FBXL14Q8N1E6 418 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 OR2C3Q8N628 320 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 OR52M1Q8NGK5 317 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 OR5L2Q8NGL0 311 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 OR2G3Q8NGZ4 309 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 POC1BQ8TC44 478 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H2BHQ93079 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 RELTQ969Z4 430 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H2BNQ99877 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H2BMQ99879 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 SLC25A31Q9H0C2 315 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 METTL9Q9H1A3 318 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 SLC2A9Q9NRM0 540 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 AK3Q9UIJ7 227 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 FER1L5A0AVI2 2057 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 E9PLN8 166 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 PPP1R2P9O14990 202 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 CXCL1P09341 107 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 OTX1P32242 354 aaPredicted RBP13.57□□□□□ -0.24
GPN1-212ENST00000616939 ZNF41P51814 821 aaPredicted RBP13.57□□□□□ -0.24
GPN1-212ENST00000616939 FBXW4P57775 412 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 ICAM4Q14773 271 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 Q3ZCU0 254 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 ASCL4Q6XD76 172 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 ZNF429Q86V71 674 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 SPSB1Q96BD6 273 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 GNPNAT1Q96EK6 184 aaPredicted RBP13.57□□□□□ -0.24
GPN1-212ENST00000616939 C14orf144Q96I85 54 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 SPIN2AQ99865 258 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 SPIN2BQ9BPZ2 258 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 PIGQQ9BRB3 760 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HDHD3Q9BSH5 251 aaPredicted RBP13.57□□□□□ -0.24
GPN1-212ENST00000616939 ZNF160Q9HCG1 818 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 MMP17Q9ULZ9 603 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 VDAC3Q9Y277 283 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 MMP24Q9Y5R2 645 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 H3BML4 177 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 TLX3O43711 291 aaPredicted RBP13.56□□□□□ -0.24
GPN1-212ENST00000616939 QDPRP09417 244 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 GABRR1P24046 479 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 RND2P52198 227 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 NKX6-1P78426 367 aaPredicted RBP13.56□□□□□ -0.24
GPN1-212ENST00000616939 DLK1P80370 383 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 KHDC3LQ587J8 217 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 C10orf128Q5T292 105 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 OR10D4PQ8NGN7 298 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 OR1L3Q8NH93 324 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 TOMM40LQ969M1 308 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 RCC1LQ96I51 464 aaKnown RBP13.56□□□□□ -0.24
GPN1-212ENST00000616939 PLEKHF2Q9H8W4 249 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 ADAMTS20P59510 1910 aa13.56□□□□□ -0.24
GPN1-212ENST00000616939 TRAV1-1A0A0B4J248 108 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 DUXBA0A1W2PPF3 345 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 ZNF850A8MQ14 1090 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 TERTO14746 1132 aaKnown RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 GPR37O15354 613 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 ST8SIA5O15466 376 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 FAHP16930 419 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 MSR1P21757 451 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 CCL20P78556 96 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 SP6Q3SY56 376 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 TMEM176BQ3YBM2 270 aaPredicted RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 LBHQ53QV2 105 aaPredicted RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 SLC22A25Q6T423 547 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 GJC3Q8NFK1 279 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 OR5R1Q8NH85 324 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 NPRL2Q8WTW4 380 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 DUSP15Q9H1R2 295 aaPredicted RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 MTIF3Q9H2K0 278 aaKnown RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 ZNF286AQ9HBT8 521 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 TMEM242Q9NWH2 141 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 B3GALT1Q9Y5Z6 326 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 NCOA6Q14686 2063 aaPredicted RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 MYO7BQ6PIF6 2116 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 A0A1B0GX78 115 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 A0A1W2PPC4 97 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 IGSF23A1L1A6 192 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 TRDCB7Z8K6 153 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 CA3P07451 260 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 FKBP2P26885 142 aaKnown RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 BAXQ07812 192 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 LANCL3Q6ZV70 420 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms