RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 LINC00854A0A1B0GVQ3 168 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 MLNRO43193 412 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 PRAF2O60831 178 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 NDUFB6O95139 128 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 DHFRP00374 187 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 ADH4P08319 380 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 PGA5P0DJD9 388 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 PTHLHP12272 177 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 HLA-DMAP28067 261 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 TAS2R46P59540 309 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 ADORA2A-AS1P86434 159 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 GUCA2AQ02747 115 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 ZNF154Q13106 437 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 C4orf17Q53FE4 359 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 RNASE12Q5GAN4 147 aaKnown RBP10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 TMEM255AQ5JRV8 349 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 VAX1Q5SQQ9 334 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 AGAP6Q5VW22 663 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 SHEQ5VZ18 495 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 SIGIRRQ6IA17 410 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 FIP1L1Q6UN15 594 aaKnown RBP10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 Q6ZS49 121 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 NCCRP1Q6ZVX7 275 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 HOGA1Q86XE5 327 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 ARRDC1Q8N5I2 433 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 POC1AQ8NBT0 407 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 OR4C16Q8NGL9 310 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 OR10Z1Q8NGY1 313 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 MRPL24Q96A35 216 aaKnown RBP10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 UPRTQ96BW1 309 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 PRRT1Q99946 306 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 SLC25A21Q9BQT8 299 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 ESRP2Q9H6T0 727 aaKnown RBP10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 HES4Q9HCC6 221 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 ERRFI1Q9UJM3 462 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 ZDHHC8Q9ULC8 765 aa10.46□□□□□ -0.73
NEDD8-MDP1-203ENST00000604306 PLSCR5A0PG75 271 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 ATP6V1G2-DDX39BF2Z307 99 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 INMT-MINDY4F8WBC2 141 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 SSX5O60225 188 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 PFDN1O60925 122 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 RAB3DO95716 219 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 MT-ND4P03905 459 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 BCL3P20749 454 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 GIFP27352 417 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 GATA4P43694 442 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 FABP6P51161 128 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 ARFRP1Q13795 201 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 TAF9Q16594 264 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 DMRTC1Q5HYR2 192 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 NCMAPQ5T1S8 102 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 RSBN1Q5VWQ0 802 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 FAM90A1Q86YD7 464 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 CADM3Q8N126 398 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 FAM58AQ8N1B3 248 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 SCCPDHQ8NBX0 429 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 OR10AD1Q8NGE0 317 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 NUDCD2Q8WVJ2 157 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 EMG1Q92979 244 aaKnown RBP10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 ERGIC1Q969X5 290 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 SLAMF9Q96A28 289 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 NRIP2Q9BQI9 281 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 RIMS4Q9H426 269 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 KCNJ16Q9NPI9 418 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 NPDC1Q9NQX5 325 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 RASL12Q9NYN1 266 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 TREM2Q9NZC2 230 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 SCP2D1Q9UJQ7 156 aa10.45□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 ATRXP46100 2492 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 hCG_2014768A0A024R1R8 64 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 C7orf66A4D0T2 115 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 DPRXA6NFQ7 191 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 DISC1C4P0D8 188 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 GEMIN2O14893 280 aaKnown RBP10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 SYNGR1O43759 233 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 PLATP00750 562 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 CD3DP04234 171 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 GABRR1P24046 479 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 MDH2P40926 338 aaKnown RBP10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 NPBWR2P48146 333 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 MRPS15P82914 257 aaKnown RBP10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 RBM39Q14498 530 aaKnown RBP10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 ZNF146Q15072 292 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 ALKBH6Q3KRA9 238 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 PIGYQ3MUY2 71 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 RNASE10Q5GAN6 216 aaKnown RBP10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 Q6ZR03 302 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 C22orf34Q6ZV56 151 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 WDR86Q86TI4 376 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 CA5BP1Q8WTZ4 195 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 MED30Q96HR3 178 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 WFIKKN1Q96NZ8 548 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 C20orf85Q9H1P6 137 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 MMP28Q9H239 520 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 ZMAT3Q9HA38 289 aaKnown RBP10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 MYOZ1Q9NP98 299 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 CA10Q9NS85 328 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 NUDT15Q9NV35 164 aa10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 DSPP15924 2871 aaKnown RBP10.44□□□□□ -0.74
NEDD8-MDP1-203ENST00000604306 ACACBO00763 2458 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms