RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 C20orf24Q9BUV8 137 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ACTR3CQ9C0K3 210 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 CHST5Q9GZS9 411 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR51I2Q9H344 312 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 G6PC2Q9NQR9 355 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 FGF21Q9NSA1 209 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ANKRD10Q9NXR5 420 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 TREM2Q9NZC2 230 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MYOTQ9UBF9 498 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CBY1Q9Y3M2 126 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ANAPC1Q9H1A4 1944 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 C3orf85A0A1B0GTC6 90 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MDFIC2A0A1B0GVS7 189 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 A0A1W2PPV4 95 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CRYM-AS1A6NIL9 109 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 AQP7P3A6NL99 342 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 C4orf47A7E2U8 309 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ZNF814B7Z6K7 855 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 LMO7DNF2Z398 122 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 TSPAN2O60636 221 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 EIF3GO75821 320 aaKnown RBP eCLIP3.12□□□□□ -1.91
VMP1-216ENST00000592790 CA3P07451 260 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 LYL1P12980 280 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 VDAC1P21796 283 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 IGFBP4P22692 258 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MDH2P40926 338 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 SSR4P51571 173 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MRPS34P82930 218 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 FOXF1Q12946 379 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 SMAD4Q13485 552 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 HYAL4Q2M3T9 481 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 COX19Q49B96 90 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 TMEM41BQ5BJD5 291 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 TMEM240Q5SV17 173 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 FAM166AQ6J272 317 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 AAED1Q7RTV5 226 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 SLC16A13Q7RTY0 426 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 P4HA3Q7Z4N8 544 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR8B12Q8NGG6 310 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR5D18Q8NGL1 313 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR10J5Q8NHC4 309 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CPT1CQ8TCG5 803 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 THAP3Q8WTV1 239 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 PIGCQ92535 297 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 IL22RA2Q969J5 263 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 SLC25A28Q96A46 364 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CMBLQ96DG6 245 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 TIMP4Q99727 224 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ATP5SQ99766 215 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 NUDT22Q9BRQ3 303 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 GINS3Q9BRX5 216 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ANGPTL4Q9BY76 406 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 RNF122Q9H9V4 155 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MANBALQ9NQG1 85 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MED29Q9NX70 200 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 TUBD1Q9UJT1 453 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 STARD10Q9Y365 291 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CACNA1BQ00975 2339 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CEBPZOSA8MTT3 80 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ZNF705FA8MVS1 300 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 H0Y8X5 98 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ZNF735P0CB33 412 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ZNF705DP0CH99 300 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 ZNF705BP0CI00 300 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 PI3P19957 117 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 COX5AP20674 150 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OMGP23515 440 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 APLNRP35414 380 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CD200P41217 278 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR3A4PP47883 348 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 THBS3P49746 956 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ERVK-16P61578 105 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 SERF2P84101 59 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MYBPHQ13203 477 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CLN3Q13286 438 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 NR0B2Q15466 257 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 UBE2V2Q15819 145 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ADIRFQ15847 76 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 HAGHQ16775 308 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MPV17LQ2QL34 196 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 FAM209BQ5JX69 171 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 C10orf91Q5T1B1 145 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 FAM162BQ5T6X4 162 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 AADACL3Q5VUY0 350 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 TMPPEQ6ZT21 453 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 PPP1R3BQ86XI6 285 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ZFP62Q8NB50 900 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR8U1Q8NH10 309 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR51F2Q8NH61 342 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 PTPMT1Q8WUK0 201 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 MRPL38Q96DV4 380 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 GALNT14Q96FL9 552 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 REEP6Q96HR9 211 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 SF3B5Q9BWJ5 86 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 MRPL22Q9NWU5 206 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 FAM206AQ9NX38 181 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 NAT8Q9UHE5 227 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CD207Q9UJ71 328 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 A6NLC8 198 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 ZNF729A6NN14 1252 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms