RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 DUX5Q96PT3 197 aa12.93□□□□□ -0.34
LIG3-215ENST00000592690 ZCCHC4Q9H5U6 513 aa12.93□□□□□ -0.34
LIG3-215ENST00000592690 IL36RNQ9UBH0 155 aa12.93□□□□□ -0.34
LIG3-215ENST00000592690 PSORS1C1Q9UIG5 152 aa12.93□□□□□ -0.34
LIG3-215ENST00000592690 DHDHQ9UQ10 334 aa12.93□□□□□ -0.34
LIG3-215ENST00000592690 A0A1W2PQ09 198 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 DNAJC9-AS1A6NH13 148 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 TRIM77I1YAP6 450 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 SLC1A7O00341 560 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 KNG1P01042 644 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 OCM2P0CE71 109 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 OCMP0CE72 109 aaPredicted RBP12.92□□□□□ -0.34
LIG3-215ENST00000592690 BCL3P20749 454 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 NPBWR2P48146 333 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 SOX2P48431 317 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 PDCD1Q15116 288 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 RBMS3Q6XE24 437 aaKnown RBP12.92□□□□□ -0.34
LIG3-215ENST00000592690 PDZD9Q8IXQ8 264 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 ZNF561Q8N587 486 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 PARP16Q8N5Y8 322 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 KIR3DL3Q8N743 410 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 Q8N7P7 452 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 ZNF485Q8NCK3 441 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 BPIFB6Q8NFQ5 453 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 OR5D18Q8NGL1 313 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 OR52N1Q8NH53 320 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 ZFAND2BQ8WV99 257 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 EMG1Q92979 244 aaKnown RBP12.92□□□□□ -0.34
LIG3-215ENST00000592690 SIRT7Q9NRC8 400 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 C19orf12Q9NSK7 152 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 PLCXD1Q9NUJ7 323 aa12.92□□□□□ -0.34
LIG3-215ENST00000592690 RBFOX1Q9NWB1 397 aaKnown RBP12.92□□□□□ -0.34
LIG3-215ENST00000592690 CNOT2Q9NZN8 540 aaKnown RBP12.92□□□□□ -0.34
LIG3-215ENST00000592690 IGHV1-69DA0A0B4J2H0 117 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 IGKV1-12A0A0C4DH73 117 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 OGG1O15527 345 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 ANGPTL7O43827 346 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 IGKV1D-12P01611 117 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 IGHV1-69P01742 117 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 MT-ND2P03891 347 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 CALCBP10092 127 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 UBA52P62987 128 aaKnown RBP12.91□□□□□ -0.34
LIG3-215ENST00000592690 COL10A1Q03692 680 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 PDZK1IP1Q13113 114 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 DOC2BQ14184 412 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 DEFB112Q30KQ8 113 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 ASPHD2Q6ICH7 369 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 SERPINA12Q8IW75 414 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 MKXQ8IYA7 352 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 FAM185AQ8N0U4 392 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 ZFP41Q8N8Y5 198 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 OR13C5Q8NGS8 318 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 FAM216AQ8WUB2 273 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 DMRTB1Q96MA1 342 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 FKBP14Q9NWM8 211 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 BABAM2Q9NXR7 383 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 STAB1Q9NY15 2570 aa12.91□□□□□ -0.34
LIG3-215ENST00000592690 TRBV23-1A0A0A0MS06 115 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 SULT1B1O43704 296 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 TK1P04183 234 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 HCKP08631 526 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 RPSAP08865 295 aaKnown RBP12.9□□□□□ -0.34
LIG3-215ENST00000592690 C21orf33P30042 268 aaPredicted RBP12.9□□□□□ -0.34
LIG3-215ENST00000592690 SNU13P55769 128 aaKnown RBP12.9□□□□□ -0.34
LIG3-215ENST00000592690 BAMBIQ13145 260 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 KLRD1Q13241 179 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 MED21Q13503 144 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 Q8IYB0 196 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 CMTM4Q8IZR5 234 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 ASCC1Q8N9N2 400 aaKnown RBP12.9□□□□□ -0.34
LIG3-215ENST00000592690 OR4M1Q8NGD0 313 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 OR5D14Q8NGL3 314 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 CHCHD3Q9NX63 227 aaKnown RBP12.9□□□□□ -0.34
LIG3-215ENST00000592690 TAS2R4Q9NYW5 299 aa12.9□□□□□ -0.34
LIG3-215ENST00000592690 RNASEK-C17orf49H0YIS7 233 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 H0YJX3 145 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 K7N7A8 449 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 M0R1W7 72 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 ZNF737O75373 536 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 ALX3O95076 343 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 CYB5AP00167 134 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 PRKACAP17612 351 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 PRTN3P24158 256 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 DUSP1P28562 367 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 BPIFB3P59826 476 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 ZP1P60852 638 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 DMKNQ6E0U4 476 aaPredicted RBP12.89□□□□□ -0.35
LIG3-215ENST00000592690 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 FAM58AQ8N1B3 248 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 STX19Q8N4C7 294 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 GPR148Q8TDV2 347 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 TNFRSF14Q92956 283 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 ORAI1Q96D31 301 aa12.89□□□□□ -0.35
LIG3-215ENST00000592690 KIAA2026Q5HYC2 2103 aa12.88□□□□□ -0.35
LIG3-215ENST00000592690 TMEM82A0PJX8 343 aa12.88□□□□□ -0.35
LIG3-215ENST00000592690 H0YHG0 523 aa12.88□□□□□ -0.35
LIG3-215ENST00000592690 MYL12BO14950 172 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms