RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SF3B6Q9Y3B4 125 aaKnown RBP5.8□□□□□ -1.48
CDK5RAP3-209ENST00000578663 N6AMT1Q9Y5N5 214 aa5.8□□□□□ -1.48
CDK5RAP3-209ENST00000578663 METTL15A6NJ78 407 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 VGLL3A8MV65 326 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 J3QLW9 94 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 GMDSO60547 372 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PEX14O75381 377 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ZNF254O75437 659 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 RPP14O95059 124 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 LHBP01229 141 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 LCATP04180 440 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 KRT8P05787 483 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ANXA2P07355 339 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 HTR1AP08908 422 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 MUC1P15941 1255 aaPredicted RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ZNF19P17023 458 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 DCKP27707 260 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 HOXD3P31249 432 aaPredicted RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 RIDAP52758 137 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PRSS12P56730 875 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PSMA6P60900 246 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 CSNK2BP67870 215 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 IRF3Q14653 427 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 CNN3Q15417 329 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 OR8G1Q15617 311 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 RBM48Q5RL73 367 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 GLYATL3Q5SZD4 288 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ZFAND6Q6FIF0 208 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 KCTD18Q6PI47 426 aaPredicted RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 DEGS2Q6QHC5 323 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 DRAM2Q6UX65 266 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 FAM57BQ71RH2 274 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PRSS45Q7RTY3 260 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 YIPF7Q8N8F6 280 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 OR8B12Q8NGG6 310 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 OR5D13Q8NGL4 314 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 SPRYD4Q8WW59 207 aaPredicted RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 RNF166Q96A37 237 aaPredicted RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 C12orf43Q96C57 262 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PELI1Q96FA3 418 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 AJUBAQ96IF1 538 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 C4orf36Q96KX1 117 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ADAT1Q9BUB4 502 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 MCRIP2Q9BUT9 160 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 MROQ9BYG7 248 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PRSS22Q9GZN4 317 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 DNTTIP1Q9H147 329 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 BRD7Q9NPI1 651 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 INPP5EQ9NRR6 644 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ZNF319Q9P2F9 582 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 GNG8Q9UK08 70 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PITPNC1Q9UKF7 332 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 EXOSC1Q9Y3B2 195 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 TPRKBQ9Y3C4 175 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 TSSC4Q9Y5U2 329 aaPredicted RBP5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 R4GMQ9 66 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 KMT2AQ03164 3969 aa5.79□□□□□ -1.48
CDK5RAP3-209ENST00000578663 TMEM269A0A1B0GVZ9 245 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 A0A1W2PRD5 423 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 A0A1W2PRF3 423 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 A0A1W2PRM7 423 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 E9PI62 339 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 LOC110117498-PIK3R3F6TDL0 507 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 F2RL2O00254 374 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 TBX1O43435 398 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 RGS10O43665 173 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 RAMP3O60896 148 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 SULT1C4O75897 302 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 LALBAP00709 142 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 MYL12AP19105 171 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 DCTDP32321 178 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 KIR3DL2P43630 455 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 MAP2K4P45985 399 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 BMXP51813 675 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 GTF2A1P52655 376 aaPredicted RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 NANOS3P60323 173 aaKnown RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 GABARAPL2P60520 117 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ACTA2P62736 377 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ACTG2P63267 376 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 HOXA4Q00056 320 aaPredicted RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 MZT1Q08AG7 82 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 BLMHQ13867 455 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 GK2Q14410 553 aaPredicted RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 HABP2Q14520 560 aaPredicted RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 MICBQ29980 383 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ZNF829Q3KNS6 432 aaPredicted RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 LRRC10Q5BKY1 277 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 WDR38Q5JTN6 314 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ATPAF1Q5TC12 328 aaPredicted RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 XAF1Q6GPH4 301 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 HCP5Q6MZN7 132 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 FAM220AQ7Z4H9 259 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 SYS1Q8N2H4 156 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PRSS35Q8N3Z0 413 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 PNKDQ8N490 385 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 BOLLQ8N9W6 283 aaKnown RBP5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 ZNF485Q8NCK3 441 aa5.78□□□□□ -1.48
CDK5RAP3-209ENST00000578663 OR2AE1Q8NHA4 323 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms