RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TK1P04183 234 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 GNAO1P09471 354 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 POU3F4P49335 361 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 MTCP1P56278 107 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 KLRD1Q13241 179 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 OR2G6Q5TZ20 316 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 LAIR2Q6ISS4 152 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 CRIP3Q6Q6R5 217 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 C12orf54Q6X4T0 127 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 Q6YL49 198 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 C1orf122Q6ZSJ8 110 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 RNF144BQ7Z419 303 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 FAM185AQ8N0U4 392 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 OR5AK2Q8NH90 309 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 RPS4Y2Q8TD47 263 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 RGP1Q92546 391 aaPredicted RBP10.69□□□□□ -0.7
CNOT1-220ENST00000569916 GCDHQ92947 438 aaPredicted RBP10.69□□□□□ -0.7
CNOT1-220ENST00000569916 ZDHHC16Q969W1 377 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 SLC25A28Q96A46 364 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 COMMD4Q9H0A8 199 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 FAM234AQ9H0X4 552 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 UNKLQ9H9P5 680 aaKnown RBP10.69□□□□□ -0.7
CNOT1-220ENST00000569916 NOX4Q9NPH5 578 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 RBFOX1Q9NWB1 397 aaKnown RBP10.69□□□□□ -0.7
CNOT1-220ENST00000569916 IL36RNQ9UBH0 155 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 NKX1-2Q9UD57 310 aaPredicted RBP10.69□□□□□ -0.7
CNOT1-220ENST00000569916 DIMT1Q9UNQ2 313 aaKnown RBP10.69□□□□□ -0.7
CNOT1-220ENST00000569916 CAB39Q9Y376 341 aaPredicted RBP10.69□□□□□ -0.7
CNOT1-220ENST00000569916 HSPE1-MOB4S4R3N1 261 aa10.69□□□□□ -0.7
CNOT1-220ENST00000569916 TRBV2A0A0J9YWF9 115 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 A0A0U1RQK1 487 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 H0YAE9 185 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 SPRY1O43609 319 aaPredicted RBP10.68□□□□□ -0.7
CNOT1-220ENST00000569916 ZNF737O75373 536 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 MELTFP08582 738 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 RPSAP08865 295 aaKnown RBP10.68□□□□□ -0.7
CNOT1-220ENST00000569916 HKR1P10072 659 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 BCL3P20749 454 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 NPBWR2P48146 333 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 COL10A1Q03692 680 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 GABPB1Q06547 395 aaPredicted RBP10.68□□□□□ -0.7
CNOT1-220ENST00000569916 CDK5R1Q15078 307 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 MKXQ8IYA7 352 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 Q8IYB0 196 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 C8orf59Q8N0T1 100 aaPredicted RBP10.68□□□□□ -0.7
CNOT1-220ENST00000569916 PARP16Q8N5Y8 322 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 FBLIM1Q8WUP2 373 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 EMG1Q92979 244 aaKnown RBP10.68□□□□□ -0.7
CNOT1-220ENST00000569916 RFT1Q96AA3 541 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 SPACA5Q96QH8 159 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 ZCCHC4Q9H5U6 513 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 DCLRE1BQ9H816 532 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 METTL8Q9H825 291 aaKnown RBP10.68□□□□□ -0.7
CNOT1-220ENST00000569916 DHDHQ9UQ10 334 aa10.68□□□□□ -0.7
CNOT1-220ENST00000569916 EXOSC1Q9Y3B2 195 aaKnown RBP10.68□□□□□ -0.7
CNOT1-220ENST00000569916 IGKV1-12A0A0C4DH73 117 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 K7N7A8 449 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 SULT1B1O43704 296 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 ANGPTL7O43827 346 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 CYB5AP00167 134 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 LALBAP00709 142 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 IGKV1D-12P01611 117 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 CHRM2P08172 466 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 PIPP12273 146 aaPredicted RBP10.67□□□□□ -0.7
CNOT1-220ENST00000569916 MYL12AP19105 171 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 RPL31P62899 125 aaKnown RBP10.67□□□□□ -0.7
CNOT1-220ENST00000569916 GUCA2AQ02747 115 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 PDZK1IP1Q13113 114 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 BLMHQ13867 455 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 ZNF273Q14593 569 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 CCDC58Q4VC31 144 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 TMEM200BQ69YZ2 307 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 ASPHD2Q6ICH7 369 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 HCP5Q6MZN7 132 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 RPL22L1Q6P5R6 122 aaKnown RBP10.67□□□□□ -0.7
CNOT1-220ENST00000569916 TMPRSS11AQ6ZMR5 421 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 LDLRAD3Q86YD5 345 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 SERPINA12Q8IW75 414 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 FAM58AQ8N1B3 248 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 ASCC1Q8N9N2 400 aaKnown RBP10.67□□□□□ -0.7
CNOT1-220ENST00000569916 OR4M1Q8NGD0 313 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 OR5D18Q8NGL1 313 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 TSEN15Q8WW01 171 aaKnown RBP10.67□□□□□ -0.7
CNOT1-220ENST00000569916 GGHQ92820 318 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 TMEM80Q96HE8 168 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 SEBOXQ9HB31 216 aaPredicted RBP10.67□□□□□ -0.7
CNOT1-220ENST00000569916 CLEC2DQ9UHP7 191 aa10.67□□□□□ -0.7
CNOT1-220ENST00000569916 SIRT4Q9Y6E7 314 aaPredicted RBP10.67□□□□□ -0.7
CNOT1-220ENST00000569916 A0A1W2PRD5 423 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 A0A1W2PRF3 423 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 A0A1W2PRM7 423 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 TMEM82A0PJX8 343 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 NPFFO15130 113 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 KDM4BO94953 1096 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 ALX3O95076 343 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 HAND1O96004 215 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 OCM2P0CE71 109 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 OCMP0CE72 109 aaPredicted RBP10.66□□□□□ -0.7
CNOT1-220ENST00000569916 CFPP27918 469 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 UBE2E1P51965 193 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms