RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 CMTM3Q96MX0 182 aa12.44□□□□□ -0.42
SPG7-213ENST00000566221 HES4Q9HCC6 221 aa12.44□□□□□ -0.42
SPG7-213ENST00000566221 PCDHB16Q9NRJ7 776 aa12.44□□□□□ -0.42
SPG7-213ENST00000566221 DCAF16Q9NXF7 216 aa12.44□□□□□ -0.42
SPG7-213ENST00000566221 RASL12Q9NYN1 266 aa12.44□□□□□ -0.42
SPG7-213ENST00000566221 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
SPG7-213ENST00000566221 ING4Q9UNL4 249 aa12.44□□□□□ -0.42
SPG7-213ENST00000566221 MAP1AP78559 2803 aaPredicted RBP12.44□□□□□ -0.42
SPG7-213ENST00000566221 ZFHX3Q15911 3703 aa12.44□□□□□ -0.42
SPG7-213ENST00000566221 NDUFS8O00217 210 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 EGR1P18146 543 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 GIFP27352 417 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 CD80P33681 288 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 TMEM33P57088 247 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 DSCR9P59020 149 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 P2RY14Q15391 338 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 ELP2Q6IA86 826 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 FIP1L1Q6UN15 594 aaKnown RBP12.43□□□□□ -0.42
SPG7-213ENST00000566221 FAM90A1Q86YD7 464 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 BOLLQ8N9W6 283 aaKnown RBP12.43□□□□□ -0.42
SPG7-213ENST00000566221 FAM168AQ92567 244 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 RAB1CQ92928 201 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 EMG1Q92979 244 aaKnown RBP12.43□□□□□ -0.42
SPG7-213ENST00000566221 FAM3DQ96BQ1 224 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 C1orf147Q96MC9 270 aaPredicted RBP12.43□□□□□ -0.42
SPG7-213ENST00000566221 CST11Q9H112 138 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 LIN7BQ9HAP6 207 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 RBFOX1Q9NWB1 397 aaKnown RBP12.43□□□□□ -0.42
SPG7-213ENST00000566221 DNAJB11Q9UBS4 358 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 ADAM30Q9UKF2 790 aa12.43□□□□□ -0.42
SPG7-213ENST00000566221 MTORP42345 2549 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 PPIAL4EA0A075B759 164 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 OOEPA6NGQ2 149 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 PPIAL4DF5H284 164 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.42□□□□□ -0.42
SPG7-213ENST00000566221 LGALS8O00214 317 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 WNT9BO14905 357 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 PPIHO43447 177 aaKnown RBP12.42□□□□□ -0.42
SPG7-213ENST00000566221 FSTL3O95633 263 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 CSTBP04080 98 aaKnown RBP12.42□□□□□ -0.42
SPG7-213ENST00000566221 SFTPBP07988 381 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 PPIAL4FP0DN26 164 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 CALCBP10092 127 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 SLC2A2P11168 524 aaPredicted RBP12.42□□□□□ -0.42
SPG7-213ENST00000566221 ARSBP15848 533 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 MUC1P15941 1255 aaPredicted RBP12.42□□□□□ -0.42
SPG7-213ENST00000566221 SERPINA2P20848 420 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 GPR6P46095 362 aaPredicted RBP12.42□□□□□ -0.42
SPG7-213ENST00000566221 NPBWR2P48146 333 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 CLDN12P56749 244 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 GMFBP60983 142 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 FGF12P61328 243 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 BTG1P62324 171 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 MICBQ29980 383 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 SLC22A6Q4U2R8 563 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 IDNKQ5T6J7 187 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 TEX36Q5VZQ5 186 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 ACP7Q6ZNF0 438 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 OR2W3Q7Z3T1 314 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 FAM58AQ8N1B3 248 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 Q8NFD4 153 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 OR10K1Q8NGX5 313 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 PIMREGQ9BSJ6 248 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 C6orf62Q9GZU0 229 aaPredicted RBP12.42□□□□□ -0.42
SPG7-213ENST00000566221 WDR13Q9H1Z4 485 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 PPIAL4AQ9Y536 164 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 ETV7Q9Y603 341 aa12.42□□□□□ -0.42
SPG7-213ENST00000566221 TRAV38-1A0A0B4J264 116 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 C3orf80F5H4A9 247 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 F8VVB4 439 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 F8VWA3 439 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 HTR3BO95264 441 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 KNG1P01042 644 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 IGHV2-70P01814 119 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 PRKACAP17612 351 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 RBMXP38159 391 aaKnown RBP12.41□□□□□ -0.42
SPG7-213ENST00000566221 MDH2P40926 338 aaKnown RBP12.41□□□□□ -0.42
SPG7-213ENST00000566221 KCNJ8Q15842 424 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 SPIN3Q5JUX0 258 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 Q5PR19 223 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 FAM201AQ5SY85 155 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 DNM1P46Q6ZS02 220 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 BATF2Q8N1L9 274 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 OSR2Q8N2R0 312 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 MUC20Q8N307 709 aaPredicted RBP12.41□□□□□ -0.42
SPG7-213ENST00000566221 OR51D1Q8NGF3 324 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 KCNG3Q8TAE7 436 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 C10orf105Q8TEF2 133 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 MRPS24Q96EL2 167 aaKnown RBP12.41□□□□□ -0.42
SPG7-213ENST00000566221 WDFY2Q96P53 400 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 HMG20AQ9NP66 347 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 NLKQ9UBE8 527 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 FBLN5Q9UBX5 448 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 WIPI2Q9Y4P8 454 aa12.41□□□□□ -0.42
SPG7-213ENST00000566221 A0A0B4J203 849 aa12.4□□□□□ -0.42
SPG7-213ENST00000566221 ISPDA4D126 451 aa12.4□□□□□ -0.42
SPG7-213ENST00000566221 CRTAPO75718 401 aaPredicted RBP12.4□□□□□ -0.42
SPG7-213ENST00000566221 VSIG8P0DPA2 414 aa12.4□□□□□ -0.42
SPG7-213ENST00000566221 GTF2F2P13984 249 aa12.4□□□□□ -0.42
SPG7-213ENST00000566221 MGMTP16455 207 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms