RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 FAM83FQ8NEG4 500 aaPredicted RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR2AK2Q8NG84 335 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR4F15Q8NGB8 312 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR10G3Q8NGC4 313 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR51G2Q8NGK0 314 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR5J2Q8NH18 312 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR4F5Q8NH21 305 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 PFN4Q8NHR9 129 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 MFSD8Q8NHS3 518 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 PAQR8Q8TEZ7 354 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 DUSP19Q8WTR2 217 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 SPRYD4Q8WW59 207 aaPredicted RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 DEDD2Q8WXF8 326 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 HSD17B8Q92506 261 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 GHSRQ92847 366 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TMEM203Q969S6 136 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 PHF21AQ96BD5 680 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 DDIT4LQ96D03 193 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 OMA1Q96E52 524 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 FBXO17Q96EF6 278 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 DIRAS2Q96HU8 199 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 GAL3ST4Q96RP7 486 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TMED9Q9BVK6 235 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 NMNAT2Q9BZQ4 307 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 SLC22A4Q9H015 551 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 NXF5Q9H1B4 397 aaKnown RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 OR51V1Q9H2C8 321 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 TPK1Q9H3S4 243 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 PTGES2Q9H7Z7 377 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ADGRL4Q9HBW9 690 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ABCB10Q9NRK6 738 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 PLSCR4Q9NRQ2 329 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 ZNF275Q9NSD4 429 aaPredicted RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 MRPL39Q9NYK5 338 aaKnown RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 TREM2Q9NZC2 230 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 COPZ2Q9P299 210 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 RPUSD1Q9UJJ7 312 aaKnown RBP2.68□□□□□ -1.98
SPG11-225ENST00000561391 CLEC4AQ9UMR7 237 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 IER3IP1Q9Y5U9 82 aa2.68□□□□□ -1.98
SPG11-225ENST00000561391 IGKV1D-42A0A075B6H8 117 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 IGLV3-32A0A0A0MS00 114 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 TMED7-TICAM2A0A0A6YYA0 188 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 LOC102725191A0A1B0GVB3 256 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 A0A1B0GVG6 124 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 PRSS37A4D1T9 235 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 FAM183AA6NL82 134 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 TMEM212A6NML5 194 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GJE1A6NN92 205 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 LYNX1G3V0Z9 82 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 H0YC42 278 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 J3QLW9 94 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 M0R129 80 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GABRPO00591 440 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 CTDSP2O14595 271 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 SULT1B1O43704 296 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 FADS1O60427 444 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 EIF1BO60739 113 aaKnown RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 ICOSLGO75144 302 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GAGE7O76087 117 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 VAMP5O95183 116 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 SLC2A10O95528 541 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 NGFP01138 241 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 IGHMP01871 453 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 CLPSP04118 112 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 CD2P06729 351 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GSTT2BP0CG30 244 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GAGE12FP0CL80 117 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GAGE12GP0CL81 117 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GAGE12IP0CL82 117 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 TRAPPC2P0DI81 140 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 TRAPPC2BP0DI82 140 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 LYNX1P0DP58 116 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 SLC2A2P11168 524 aaPredicted RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 DAOP14920 347 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 HIST1H1CP16403 213 aaKnown RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 ZNF19P17023 458 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 SPI1P17947 270 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 NPR2P20594 1047 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 EVI2BP34910 448 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 AQP2P41181 271 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GUCA1AP43080 201 aaPredicted RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 PITPNBP48739 271 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 EVX1P49640 407 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 CCR4P51679 360 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 ZNF41P51814 821 aaPredicted RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 MFAP4P55083 255 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 AP3S2P59780 193 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 SEC61BP60468 96 aaKnown RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 RPL27P61353 136 aaKnown RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 ERVK-25P63136 954 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 MRPS34P82930 218 aaKnown RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 GLO1Q04760 184 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GAGE1Q13065 139 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GAGE4Q13068 117 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 ASAH1Q13510 395 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 P2RY6Q15077 328 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 QPRTQ15274 297 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 GLYR1Q49A26 553 aaPredicted RBP2.67□□□□□ -1.98
SPG11-225ENST00000561391 HSD17B12Q53GQ0 312 aa2.67□□□□□ -1.98
SPG11-225ENST00000561391 PYDC2Q56P42 97 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms