RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TUBG2Q9NRH3 451 aa8.37□□□□□ -1.07
SIX4-202ENST00000554079 CES1P1Q9UKY3 287 aa8.37□□□□□ -1.07
SIX4-202ENST00000554079 DHDHQ9UQ10 334 aa8.37□□□□□ -1.07
SIX4-202ENST00000554079 B3GALT5Q9Y2C3 310 aa8.37□□□□□ -1.07
SIX4-202ENST00000554079 LRP12Q9Y561 859 aa8.37□□□□□ -1.07
SIX4-202ENST00000554079 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 A0A1B0GWA3 101 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 OR5B21A6NL26 309 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 NPIPA7E9PJI5 369 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 K7ERU9 68 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 NPIPA8P0DM63 369 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 ESDP10768 282 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 GCH1P30793 250 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 BLKP51451 505 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 PAFAH1B2P68402 229 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 EWSR1Q01844 656 aaKnown RBP eCLIP8.36□□□□□ -1.07
SIX4-202ENST00000554079 HYAL1Q12794 435 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 IL13RA2Q14627 380 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 SNAI3Q3KNW1 292 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 LRRC69Q6ZNQ3 347 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 ZNF709Q8N972 641 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 ZNF519Q8TB69 540 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 WFDC5Q8TCV5 224 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 DYRK2Q92630 601 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 EMG1Q92979 244 aaKnown RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 SDF2Q99470 211 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 ABHD6Q9BV23 337 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 LPAR5Q9H1C0 372 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 MTIF3Q9H2K0 278 aaKnown RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 PELI2Q9HAT8 420 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 MKKSQ9NPJ1 570 aaPredicted RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 SOHLH2Q9NX45 425 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 EHFQ9NZC4 300 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 CLN8Q9UBY8 286 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 SMPXQ9UHP9 88 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 TP53TG3Q9ULZ0 132 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 C14orf166Q9Y224 244 aaKnown RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 SLC5A6Q9Y289 635 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 LRRK1Q38SD2 2015 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 TRPM6Q9BX84 2022 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 NPIPA5A0A0B4J1W7 369 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 FEZF1A0PJY2 475 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 MEGF11A6BM72 1044 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 AQP7P3A6NL99 342 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 ZNF732B4DXR9 585 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 PITX3O75364 302 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 DBIP07108 87 aaKnown RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 DBHP09172 617 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 BCL2P10415 239 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 CSNK2A2P19784 350 aaPredicted RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 CORO1AP31146 461 aaKnown RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 SSR2P43308 183 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 SLC11A1P49279 550 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 MTCP1P56278 107 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 RAB38P57729 211 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 TPPP2P59282 170 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 MFGE8Q08431 387 aaPredicted RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 ARL6IP1Q15041 203 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 SHBQ15464 509 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 SPATA45Q537H7 98 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 Q6ZN92 141 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 WFDC8Q8IUA0 241 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 DCAF4L2Q8NA75 395 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 SCAMP4Q969E2 229 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 WBP2Q969T9 261 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 PPP1R14AQ96A00 147 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 OR5B12Q96R08 314 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 MRPL13Q9BYD1 178 aaKnown RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 MEGF9Q9H1U4 602 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 C11orf1Q9H5F2 150 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 C6orf106Q9H6K1 298 aaPredicted RBP8.36□□□□□ -1.07
SIX4-202ENST00000554079 WDR76Q9H967 626 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 MANBALQ9NQG1 85 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 NAT8Q9UHE5 227 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 RNF114Q9Y508 228 aa8.36□□□□□ -1.07
SIX4-202ENST00000554079 LOC102724200A0A096LPH7 203 aaPredicted RBP8.35□□□□□ -1.07
SIX4-202ENST00000554079 MYADML2A6NDP7 307 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 C4orf51C9J302 202 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 PROB1E7EW31 1015 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 H7BYZ3 331 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 MSTNO14793 375 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 GJB5O95377 273 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 RPS27P42677 84 aaKnown RBP8.35□□□□□ -1.07
SIX4-202ENST00000554079 LGALS7P47929 136 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 HINT1P49773 126 aaPredicted RBP8.35□□□□□ -1.07
SIX4-202ENST00000554079 ASCL1P50553 236 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 RAB28P51157 221 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 ADIRFQ15847 76 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 TCTN1Q2MV58 587 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 TRMT12Q53H54 448 aaKnown RBP8.35□□□□□ -1.07
SIX4-202ENST00000554079 TCEAL5Q5H9L2 206 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 PRR27Q6MZM9 219 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 LINC00114Q6XXX2 140 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 CYP2G1PQ6ZSU1 146 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 C1orf174Q8IYL3 243 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 FBXL14Q8N1E6 418 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 C2orf73Q8N5S3 287 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms