RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 SYT3Q9BQG1 590 aa11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 ANGPTL4Q9BY76 406 aa11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 C11orf1Q9H5F2 150 aa11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 UFSP2Q9NUQ7 469 aa11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 NECAP2Q9NVZ3 263 aa11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 KIAA1456Q9P272 454 aa11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 HSF4Q9ULV5 492 aa11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 CA14Q9ULX7 337 aa11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 PUS1Q9Y606 427 aaKnown RBP eCLIP11.15□□□□□ -0.62
CALCOCO1-217ENST00000549935 TRBV11-1A0A0K0K1C0 115 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 H3BQ15 152 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 STMND1H3BQB6 276 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 HSD17B6O14756 317 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR5AC1P0C628 307 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 ANOS1P23352 680 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF266Q14584 549 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 CLEC9AQ6UXN8 241 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 FAM57BQ71RH2 274 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 ANKRD37Q7Z713 158 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 LGI3Q8N145 548 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR6X1Q8NH79 312 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 RNF138Q8WVD3 245 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 RTN4IP1Q8WWV3 396 aaPredicted RBP11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 GTF3AQ92664 365 aaKnown RBP11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 SLAMF9Q96A28 289 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 MSI2Q96DH6 328 aaKnown RBP11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 Q96M66 194 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 LIME1Q9H400 295 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 GFOD1Q9NXC2 390 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 WDFY3Q8IZQ1 3526 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 MED12Q93074 2177 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 RER1O15258 196 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 IFNA10P01566 189 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 HSPB1P04792 205 aaKnown RBP11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 HEXBP07686 556 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF728P0DKX0 622 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 GLB1P16278 677 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 SERPINA2P20848 420 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 UCP3P55916 312 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 NDUFA6P56556 154 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 MFAP5Q13361 173 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 DMRTC1Q5HYR2 192 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 LYZL2Q7Z4W2 148 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF283Q8N7M2 679 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 NFAM1Q8NET5 270 aaPredicted RBP11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR4D5Q8NGN0 318 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 FAM213BQ8TBF2 198 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 RAB39BQ96DA2 213 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 BOD1Q96IK1 185 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 LYZL4Q96KX0 146 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 RARRES2Q99969 163 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 PLEKHJ1Q9NW61 149 aa11.14□□□□□ -0.63
CALCOCO1-217ENST00000549935 ASCC3Q8N3C0 2202 aaKnown RBP11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 MSTNO14793 375 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 TRAF3IP2O43734 574 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 RAMP1O60894 148 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 DHRS3O75911 302 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 KLK3P07288 261 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 NHLH2Q02577 135 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 UBE2V2Q15819 145 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 TMEM182Q6ZP80 229 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 C6orf201Q7Z4U5 140 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 SLC25A45Q8N413 288 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 HSD17B11Q8NBQ5 300 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 MARS2Q96GW9 593 aaKnown RBP11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 C14orf144Q96I85 54 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 MRGPRX4Q96LA9 322 aa11.13□□□□□ -0.63
CALCOCO1-217ENST00000549935 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 A0A1W2PNR3 127 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 ZNF724A8MTY0 619 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 TGOLN2O43493 480 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 DIRAS3O95661 229 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 SFTPDP35247 375 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 TAGLN2P37802 199 aaKnown RBP11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 RBP2P50120 134 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 LSM6P62312 80 aaKnown RBP11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 GNMTQ14749 295 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 ABCA11PQ4W5N1 156 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 FAM69BQ5VUD6 431 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 RHBDD2Q6NTF9 364 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 FBXW12Q6X9E4 464 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 SLC35E3Q7Z769 313 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 FBXL14Q8N1E6 418 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 CADM4Q8NFZ8 388 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR5D18Q8NGL1 313 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 OR10G4Q8NGN3 311 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 Q8WTZ3 238 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
CALCOCO1-217ENST00000549935 CPNE4Q96A23 557 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms