RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TOMM34Q15785 309 aaPredicted RBP11.25□□□□□ -0.61
SPG11-203ENST00000535302 FAHD1Q6P587 224 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 TRAT1Q6PIZ9 186 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 MVB12AQ96EY5 273 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 PELI1Q96FA3 418 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 IP6K3Q96PC2 410 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 TSPAN32Q96QS1 320 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 EPXP11678 715 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 GNG4P50150 75 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 HFEQ30201 348 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 Q6ZNX1 250 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 RBPMS2Q6ZRY4 209 aaKnown RBP11.25□□□□□ -0.61
SPG11-203ENST00000535302 ARHGAP5-AS1Q96IT6 56 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 MRPL37Q9BZE1 423 aaKnown RBP11.25□□□□□ -0.61
SPG11-203ENST00000535302 RHOFQ9HBH0 211 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 K7ESF4 209 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 EVX1P49640 407 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 TMEM116Q8NCL8 245 aa11.25□□□□□ -0.61
SPG11-203ENST00000535302 IGHV1OR15-9A0A0B4J2B8 117 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 NGFP01138 241 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 ORM1P02763 201 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 LPAR6P43657 344 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 WDR38Q5JTN6 314 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 ZNF574Q6ZN55 896 aaPredicted RBP11.24□□□□□ -0.61
SPG11-203ENST00000535302 LYG2Q86SG7 212 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 CNTD2Q9H8S5 307 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 DNAJC13O75165 2243 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 ATXN7O15265 892 aaPredicted RBP11.24□□□□□ -0.61
SPG11-203ENST00000535302 TOX3O15405 576 aaPredicted RBP11.24□□□□□ -0.61
SPG11-203ENST00000535302 PPOXP50336 477 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 FUT6P51993 359 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 ADAMTSL3P82987 1691 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 TMEM272A0A1B0GTI8 110 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 BTG1P62324 171 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 SCGB1D4Q6XE38 83 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 OR8A1Q8NGG7 326 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 HDGFL3Q9Y3E1 203 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 FCN1O00602 326 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 CISD3P0C7P0 127 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 CSF2RBP32927 897 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 RPL29P47914 159 aaKnown RBP11.24□□□□□ -0.61
SPG11-203ENST00000535302 PRICKLE4Q2TBC4 344 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 SH2D5Q6ZV89 423 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 KMT5CQ86Y97 462 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 OTOSQ8NHW6 89 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 MCHR2Q969V1 340 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 IL36GQ9NZH8 169 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 IGHV1OR21-1A0A087WYE8 117 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 ZNF137PP52743 207 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 ZNF154Q13106 437 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 TRIP6Q15654 476 aaKnown RBP11.24□□□□□ -0.61
SPG11-203ENST00000535302 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 SYS1Q8N2H4 156 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 C5orf17Q8NAS9 161 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 OR10D3Q8NH80 312 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 WDR61Q9GZS3 305 aaKnown RBP11.24□□□□□ -0.61
SPG11-203ENST00000535302 FAM60AQ9NP50 221 aa11.24□□□□□ -0.61
SPG11-203ENST00000535302 PJVKQ0ZLH3 352 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 ZNF628Q5EBL2 1059 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 LIMS2Q7Z4I7 341 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 LILRA5A6NI73 299 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 C1QBP02746 253 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 SOX8P57073 446 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 TNFAIP6P98066 277 aaPredicted RBP11.23□□□□□ -0.61
SPG11-203ENST00000535302 VMA21Q3ZAQ7 101 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 RABAC1Q9UI14 185 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 PATE3B3GLJ2 98 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 M0R2Z0 102 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 ACER2Q5QJU3 275 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 ABI3BPQ7Z7G0 1075 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 DNAJB12Q9NXW2 375 aaKnown RBP11.23□□□□□ -0.61
SPG11-203ENST00000535302 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
SPG11-203ENST00000535302 GLULP15104 373 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 GGNBP1Q5YKI7 109 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 SPRED2Q7Z698 418 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 EID2BQ96D98 161 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 ZNF764Q96H86 408 aaPredicted RBP11.23□□□□□ -0.61
SPG11-203ENST00000535302 CXorf58Q96LI9 332 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 MTCH2Q9Y6C9 303 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 MBTPS2O43462 519 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 ZNF737O75373 536 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 FAM24BQ8N5W8 94 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 APOBEC3DQ96AK3 386 aaPredicted RBP11.23□□□□□ -0.61
SPG11-203ENST00000535302 GPX7Q96SL4 187 aaPredicted RBP11.23□□□□□ -0.61
SPG11-203ENST00000535302 A0A0B4J2E0 115 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 A0A1B0GX12 115 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 TMEM30CPA0ZSE6 113 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 ZNF32P17041 273 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 WNT5AP41221 380 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 CALHM3Q86XJ0 350 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 DND1Q8IYX4 353 aaKnown RBP11.23□□□□□ -0.61
SPG11-203ENST00000535302 GVQW1Q8N7I0 195 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 ZPBPQ9BS86 351 aa11.23□□□□□ -0.61
SPG11-203ENST00000535302 K7EQS6 105 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 FXYD1O00168 92 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 FAM87AP0C7U9 286 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 AANATQ16613 207 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms