RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ZDHHC11Q9H8X9 412 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ISG20L2Q9H9L3 353 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 ISYNA1Q9NPH2 558 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SLC17A5Q9NRA2 495 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 TECRQ9NZ01 308 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 IL36GQ9NZH8 169 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 VPREB3Q9UKI3 123 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 FZR1Q9UM11 496 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 C14orf166Q9Y224 244 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 LSM5Q9Y4Y9 91 aaKnown RBP2.6□□□□□ -1.99
PTPRK-220ENST00000531466 BICRAQ9NZM4 1560 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 SMARCA4P51532 1647 aa2.6□□□□□ -1.99
PTPRK-220ENST00000531466 CD109Q6YHK3 1445 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ABCA10Q8WWZ4 1543 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 BAZ1AQ9NRL2 1556 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TGIF2-C20orf24A0A0A6YYL0 155 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 A0A0B4J2E0 115 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CENPVL3A0A0U1RRI6 287 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 A0A1B0GX12 115 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TSPAN11A1L157 253 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 LINC00862A6NCI5 91 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 LRIT2A6NDA9 550 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TVP23AA6NH52 213 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 KRBOX1C9JBD0 128 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 F5H5T6 163 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 H3BSA7 217 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 J3QLI3 93 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TAPBPO15533 448 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF861PO60384 105 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 EIF4E2O60573 245 aaKnown RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ALOX12BO75342 701 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 MPDU1O75352 247 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 GADD45GO95257 159 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 GPR75O95800 540 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 C1QCP02747 245 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 GAPDHP04406 335 aaKnown RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 IGF1P05019 195 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 C8GP07360 202 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CSF3P09919 207 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CT62P0C5K7 136 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 SULT1A3P0DMM9 295 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 SULT1A4P0DMN0 295 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ABOP16442 354 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 GPX2P18283 190 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 SLC2A5P22732 501 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 RPS12P25398 132 aaKnown RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 LOXP28300 417 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 FMO3P31513 532 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 RPA3P35244 121 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 IFNGR2P38484 337 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 LEPP41159 167 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 MAGEA5P43359 124 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 UBE2MP61081 183 aaKnown RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 RPS15AP62244 130 aaKnown RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 SELENOTP62341 195 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TBPL1P62380 186 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 RPS27AP62979 156 aaKnown RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 IFITM2Q01629 132 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 EWSR1Q01844 656 aaKnown RBP eCLIP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 KLRB1Q12918 225 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ATXN7L3Q14CW9 347 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 OR8G1Q15617 311 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ZIC1Q15915 447 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TMEM128Q5BJH2 165 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 C6orf52Q5T4I8 152 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CST9Q5W186 159 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TFAP2EQ6VUC0 442 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 MBOAT1Q6ZNC8 495 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TMPPEQ6ZT21 453 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ASRGL1Q7L266 308 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 FA2HQ7L5A8 372 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 FAM19A5Q7Z5A7 132 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CMC1Q7Z7K0 106 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CROCCP2Q86T23 111 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF547Q8IVP9 402 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CPNE9Q8IYJ1 553 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CMTM1Q8IZ96 169 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 C8orf59Q8N0T1 100 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 DHRSXQ8N5I4 330 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ATPAF2Q8N5M1 289 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ACBD7Q8N6N7 88 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ZNRF1Q8ND25 227 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 VN1R2Q8NFZ6 395 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 OR2Z1Q8NG97 314 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 OR4P4Q8NGL7 312 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 OR4S2Q8NH73 311 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 GPR148Q8TDV2 347 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 DOK4Q8TEW6 326 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 Q8WTZ3 238 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 SDR42E1Q8WUS8 393 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 OR8D1Q8WZ84 308 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 NEIL2Q969S2 332 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ELSPBP1Q96BH3 223 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 MRAP2Q96G30 205 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 OR10C1Q96KK4 312 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CNBD2Q96M20 576 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 RBP7Q96R05 134 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF382Q96SR6 550 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 GPER1Q99527 375 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 GPR22Q99680 433 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms