RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 LHFPL3Q86UP9 236 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 TPRA1Q86W33 373 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 RDH10Q8IZV5 341 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 OR6V1Q8N148 313 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 SYS1Q8N2H4 156 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 BOLLQ8N9W6 283 aaKnown RBP7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 SLC37A3Q8NCC5 494 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 SLC26A10Q8NG04 563 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 OR5L1Q8NGL2 311 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 TMEM203Q969S6 136 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 OTULINQ96BN8 352 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 MRPL48Q96GC5 212 aaKnown RBP7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 ATF6BQ99941 703 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 TMED9Q9BVK6 235 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 IFT27Q9BW83 186 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 PPP1R3EQ9H7J1 279 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 ZNRD1Q9P1U0 126 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 RNF7Q9UBF6 113 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 ZNF221Q9UK13 617 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 SIGLEC9Q9Y336 463 aa7.55□□□□□ -1.2
CHMP4A-205ENST00000531158 IGHV3OR15-7A0A075B7D8 119 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 RNASEK-C17orf49H0YIS7 233 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 IDH3BO43837 385 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 SC5DO75845 299 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 CCNKO75909 580 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 TXNDC12O95881 172 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 LHBP01229 141 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 GYPAP02724 150 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 LIPFP07098 398 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 IRF2P14316 349 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 AMY2BP19961 511 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 MYL9P24844 172 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 AZGP1P25311 298 aaKnown RBP7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 MAP2K3P46734 347 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 CRMP1Q14194 572 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 C2orf68Q2NKX9 166 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 METTL11BQ5VVY1 283 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 HACD4Q5VWC8 232 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 CD276Q5ZPR3 534 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 MZT2BQ6NZ67 158 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 CNIH2Q6PI25 160 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 TMEM91Q6ZNR0 172 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 C11orf53Q8IXP5 236 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 PNKDQ8N490 385 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 Q8N7P7 452 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 ZFP41Q8N8Y5 198 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 GJC3Q8NFK1 279 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 OR11L1Q8NGX0 322 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 OR2AE1Q8NHA4 323 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 PPP1R35Q8TAP8 253 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 HAVCR2Q8TDQ0 301 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 ERGIC1Q969X5 290 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 SEH1LQ96EE3 360 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 MAP6Q96JE9 813 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 ADAT1Q9BUB4 502 aaKnown RBP7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 NDEL1Q9GZM8 345 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 ADGRL4Q9HBW9 690 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 RABL2AQ9UBK7 228 aaPredicted RBP7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 RPUSD1Q9UJJ7 312 aaKnown RBP7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 VPREB3Q9UKI3 123 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 RABL2BQ9UNT1 228 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 IER3IP1Q9Y5U9 82 aa7.54□□□□□ -1.2
CHMP4A-205ENST00000531158 OOEPA6NGQ2 149 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 HMX3A6NHT5 357 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 FAM183AA6NL82 134 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 CD300LBA8K4G0 201 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 F5H5K5 113 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 RGS13O14921 159 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 ARPC3O15145 178 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 OPN1MWP04001 364 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 KRT8P05787 483 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 CSF1P09603 554 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 OR2T7P0C7T2 308 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 OPN1MW2P0DN77 364 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 OPN1MW3P0DN78 364 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 SLC2A2P11168 524 aaPredicted RBP7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 TGM4P49221 684 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 RPS7P62081 194 aaKnown RBP7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 ZNF92Q03936 586 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 KLRD1Q13241 179 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 OR8B8Q15620 311 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 KCNJ8Q15842 424 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 NDUFA5Q16718 116 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 CDONQ4KMG0 1287 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 PYDC2Q56P42 97 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 RSBN1Q5VWQ0 802 aaPredicted RBP7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 TEX36Q5VZQ5 186 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 GPR139Q6DWJ6 353 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 DMKNQ6E0U4 476 aaPredicted RBP7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 SLC35E4Q6ICL7 350 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 BAIAP2L2Q6UXY1 529 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 DPY19L2P2Q6ZN68 376 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 MS4A15Q8N5U1 240 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 FAM216BQ8N7L0 139 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 PNLDC1Q8NA58 520 aaKnown RBP7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 SCCPDHQ8NBX0 429 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 LY6G5BQ8NDX9 201 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 OR10H4Q8NGA5 316 aa7.53□□□□□ -1.2
CHMP4A-205ENST00000531158 OR6F1Q8NGZ6 308 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms