RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 C22orf46C9J442 243 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 F5H0A9 414 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 IFNL4K9M1U5 179 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CCRL2O00421 344 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 TNFRSF13BO14836 293 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CD5LO43866 347 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 PSPNO60542 156 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SC5DO75845 299 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 HAND1O96004 215 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CYB5AP00167 134 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CD1AP06126 327 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 UCHL1P09936 223 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC2A2P11168 524 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CD36P16671 472 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 NDUFB7P17568 137 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SRMP19623 302 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SERPINA2P20848 420 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 GABRR1P24046 479 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 MPZP25189 248 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 GABRA5P31644 462 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 PRDX2P32119 198 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CFHR2P36980 270 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 PTGFRP43088 359 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 GZMKP49863 264 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ERVK11-1P61568 191 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SRSF2Q01130 221 aaKnown RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 MXD1Q05195 221 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 EDDM3AQ14507 147 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CR1LQ2VPA4 569 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC22A6Q4U2R8 563 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM155Q4W5P6 130 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ESCO2Q56NI9 601 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 HES5Q5TA89 166 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 DCAF12L2Q5VW00 463 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 TEX36Q5VZQ5 186 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 WDR25Q64LD2 544 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 AWAT2Q6E213 333 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM166AQ6J272 317 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF529Q6P280 563 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 GLIPR1L1Q6UWM5 242 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF788Q6ZQV5 615 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 DCDC5Q6ZRR9 648 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 C1orf229Q6ZS94 237 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 BTN2A1Q7KYR7 527 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 NR2C2APQ86WQ0 139 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM58AQ8N1B3 248 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 MUC20Q8N307 709 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 BPIFB2Q8N4F0 458 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SPICQ8N5J4 248 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 MS4A15Q8N5U1 240 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ASCC1Q8N9N2 400 aaKnown RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 LINC01356Q8N9X3 169 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM104Q8NE00 496 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 OR10Z1Q8NGY1 313 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 HAVCR2Q8TDQ0 301 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 C22orf15Q8WYQ4 148 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM46BQ96A09 425 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM186Q96B77 213 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 C10orf35Q96D05 121 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 RAB39BQ96DA2 213 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 NRIP2Q9BQI9 281 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 DCTN5Q9BTE1 182 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CENPOQ9BU64 300 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SSBP3Q9BWW4 388 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 PKIBQ9C010 78 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 NAA50Q9GZZ1 169 aaKnown RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 PPA2Q9H2U2 334 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF696Q9H7X3 374 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 HMG20AQ9NP66 347 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 TXNL4BQ9NX01 149 aaKnown RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 NDUFB11Q9NX14 153 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CKLFQ9UBR5 152 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 CLN8Q9UBY8 286 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 MIOXQ9UGB7 285 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF222Q9UK12 451 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 MRPS28Q9Y2Q9 187 aaKnown RBP3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 POLDIP2Q9Y2S7 368 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 MAB21L2Q9Y586 359 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 NAV2Q8IVL1 2488 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 AKAP9Q99996 3911 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 ARFGEF3Q5TH69 2177 aa3.82□□□□□ -1.8
CHMP4A-202ENST00000524955 SPG11Q96JI7 2443 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 A8MV72 311 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 SIGLEC5O15389 551 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 NDUFB3O43676 98 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 MRPS14O60783 128 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 NOS1APO75052 506 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 KDM4BO94953 1096 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 MPIG6BO95866 241 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 OR2H2O95918 312 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 KNG1P01042 644 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 CSTBP04080 98 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 HEXAP06865 529 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 ACAA1P09110 424 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 FOSL1P15407 271 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF44P15621 663 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 MUC1P15941 1255 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 CCL3L1P16619 93 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms