RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TRGV10A0A0A0MS01 117 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 ZNF66Q6ZN08 573 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 HIF1ANQ9NWT6 349 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 RER1O15258 196 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 SULT1A3P0DMM9 295 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 SULT1A4P0DMN0 295 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 CTRB1P17538 263 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 CTRB2Q6GPI1 263 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 ATG4DQ86TL0 474 aaPredicted RBP14.37□□□□□ -0.11
USP42-207ENST00000521713 MYOZ1Q9NP98 299 aaPredicted RBP14.37□□□□□ -0.11
USP42-207ENST00000521713 MAGEA5P43359 124 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 LIPT2A6NK58 231 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 LYZL6O75951 148 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 ADH4P08319 380 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 OR10J4P0C629 311 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 CCL3P10147 92 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 ERGP11308 486 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 MICBQ29980 383 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 UQCC1Q9NVA1 299 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 MTCH1Q9NZJ7 389 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 V9GYH0 126 aa14.37□□□□□ -0.11
USP42-207ENST00000521713 CHEK1O14757 476 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 TOMM20LQ6UXN7 152 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 MUC20Q8N307 709 aaPredicted RBP14.36□□□□□ -0.11
USP42-207ENST00000521713 MRPS24Q96EL2 167 aaKnown RBP14.36□□□□□ -0.11
USP42-207ENST00000521713 PLEKHB1Q9UF11 243 aaPredicted RBP14.36□□□□□ -0.11
USP42-207ENST00000521713 RPH3ALQ9UNE2 315 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 DHRS3O75911 302 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 WISP3O95389 354 aaPredicted RBP14.36□□□□□ -0.11
USP42-207ENST00000521713 IGHA2P01877 340 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 SP1P08047 785 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 ZNF774Q6NX45 483 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 PRSS54Q6PEW0 395 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 FAM181AQ8N9Y4 354 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 FAM210BQ96KR6 192 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 CHST6Q9GZX3 395 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 GFRA3O60609 400 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 ZIC2O95409 532 aaPredicted RBP14.36□□□□□ -0.11
USP42-207ENST00000521713 CD3EP07766 207 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 FUT3P21217 361 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 GSK3AP49840 483 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 PIGPP57054 158 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 KRTDAPP60985 99 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 RPL7L1Q6DKI1 246 aaKnown RBP14.36□□□□□ -0.11
USP42-207ENST00000521713 SLC16A13Q7RTY0 426 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 TSEN54Q7Z6J9 526 aaKnown RBP14.36□□□□□ -0.11
USP42-207ENST00000521713 CDC20BQ86Y33 519 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 SFTPA2Q8IWL1 248 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 C4orf45Q96LM5 186 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 MOGAT1Q96PD6 335 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 ARL2-SNX15V9GYD0 113 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 LY86O95711 162 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 GPM6AP51674 278 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 CDONQ4KMG0 1287 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 OR2M7Q8NG81 312 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 TM4SF19Q96DZ7 209 aa14.36□□□□□ -0.11
USP42-207ENST00000521713 FAM103A1Q9BTL3 118 aaKnown RBP14.36□□□□□ -0.11
USP42-207ENST00000521713 A0A087X0M5 115 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 A0A1B0GX30 115 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 ANKRD20A5PA0PJZ0 165 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 KLF3P57682 345 aaPredicted RBP14.35□□□□□ -0.11
USP42-207ENST00000521713 DHRS2Q13268 280 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 FAM24BQ8N5W8 94 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 RGPD3A6NKT7 1758 aaPredicted RBP14.35□□□□□ -0.11
USP42-207ENST00000521713 TDRD15B5MCY1 1934 aaKnown RBP14.35□□□□□ -0.11
USP42-207ENST00000521713 MPC2O95563 127 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 OPN1MWP04001 364 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 OPN1MW2P0DN77 364 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 OPN1MW3P0DN78 364 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 CDKN2AP42771 156 aaKnown RBP14.35□□□□□ -0.11
USP42-207ENST00000521713 HFEQ30201 348 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 SPANXN5Q5MJ07 72 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 FAM122AQ96E09 287 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 TMED3Q9Y3Q3 217 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 TRAPPC1Q9Y5R8 145 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 PARP14Q460N5 1801 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 TMEM30CPA0ZSE6 113 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 HSBP1O75506 76 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 C9orf40Q8IXQ3 194 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 NHLRC2Q8NBF2 726 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 CMBLQ96DG6 245 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 SLC26A1Q9H2B4 701 aa14.35□□□□□ -0.11
USP42-207ENST00000521713 H0Y8G0 127 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 SDCBPO00560 298 aaPredicted RBP14.34□□□□□ -0.11
USP42-207ENST00000521713 TCAPO15273 167 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 DUS4LO95620 317 aaKnown RBP14.34□□□□□ -0.11
USP42-207ENST00000521713 PTHLHP12272 177 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 LIFP15018 202 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 ZNF17P17021 662 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 LSM6P62312 80 aaKnown RBP14.34□□□□□ -0.11
USP42-207ENST00000521713 SSX8Q7RTT4 187 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 ASB5Q8WWX0 329 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 GALMQ96C23 342 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 UNC13CQ8NB66 2214 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 B4DEV8 164 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 SFT2D2O95562 160 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 CTLA4P16410 223 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 WDR38Q5JTN6 314 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 FAM27D1Q5T7N8 215 aa14.34□□□□□ -0.11
USP42-207ENST00000521713 MARVELD3Q96A59 401 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms