RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ST8SIA3O43173 380 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 TOMM40O96008 361 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 H2BFMP0C1H6 154 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 GALR1P47211 349 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 ARFRP1Q13795 201 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 PRICKLE4Q2TBC4 344 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 SP6Q3SY56 376 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 C9orf50Q5SZB4 431 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 SLC25A24Q6NUK1 477 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 VN1R4Q7Z5H5 301 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 OR2L3Q8NG85 312 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 SOCS4Q8WXH5 440 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 ADAT3Q96EY9 351 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-208ENST00000519004 LMF2Q9BU23 707 aaKnown RBP11.87□□□□□ -0.51
PABPC1-208ENST00000519004 BANF2Q9H503 90 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 C11orf1Q9H5F2 150 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 SLC7A11Q9UPY5 501 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 A0A1W2PP11 408 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 BCL2P10415 239 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 CD33P20138 364 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF92Q03936 586 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM187Q14656 261 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 MMDQ15546 238 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM183BQ1AE95 376 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 CLEC12BQ2HXU8 276 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 FBXW12Q6X9E4 464 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 GRINAQ7Z429 371 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 CENPVQ7Z7K6 275 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-208ENST00000519004 CMTM1Q8IZ96 169 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 RAB42Q8N4Z0 105 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 OR52N5Q8NH56 324 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 IL22RA2Q969J5 263 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 TECTBQ96PL2 329 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 RASL10BQ96S79 203 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 IL21Q9HBE4 155 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 SEPSECSQ9HD40 501 aaKnown RBP11.86□□□□□ -0.51
PABPC1-208ENST00000519004 Q9N2K0 584 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 OR6C3Q9NZP0 311 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 ALPK2Q86TB3 2170 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 CBY3A6NI87 242 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 FOXS1O43638 330 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 FGF17O60258 216 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 OR6A2O95222 327 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 OR5G3P0C626 314 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-208ENST00000519004 PEBP1P30086 187 aaKnown RBP11.86□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF41P51814 821 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-208ENST00000519004 RUNX1Q01196 453 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 EGR4Q05215 589 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF141Q15928 474 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 PSRC1Q6PGN9 363 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-208ENST00000519004 GLIPR1L1Q6UWM5 242 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF765Q7L2R6 523 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 OR2C3Q8N628 320 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 IMMP2LQ96T52 175 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 ELL3Q9HB65 397 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
PABPC1-208ENST00000519004 OBSL1O75147 1896 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 TRAV1-1A0A0B4J248 108 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 TRAV39A0A0B4J263 110 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 HSBP1L1C9JCN9 74 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 C16orf54Q6UWD8 224 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM25Q86YD3 366 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 HOXB13Q92826 284 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-208ENST00000519004 MOB3AQ96BX8 217 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 SPACA5Q96QH8 159 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 OR1A2Q9Y585 309 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 CLDN16Q9Y5I7 305 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 IGLV1-36A0A0B4J1U3 117 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 A0A0U1RQV5 110 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 LINC01553A4QN01 128 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 ZFP92A6NM28 416 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 LILRA1O75019 489 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 DUSP1P28562 367 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 S100A7P31151 101 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF93P35789 620 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-208ENST00000519004 ADIRFQ15847 76 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 Q6ZWC4 215 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 ATG4DQ86TL0 474 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM52Q8NDY8 209 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 Q8NFD4 153 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 OR52R1Q8NGF1 315 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF845Q96IR2 970 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-208ENST00000519004 C18orf12Q96KH6 178 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 CIB3Q96Q77 187 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-208ENST00000519004 DAPP1Q9UN19 280 aa11.85□□□□□ -0.51
PABPC1-208ENST00000519004 IGKV1D-8A0A087WSZ0 117 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 MAP1LC3B2A6NCE7 125 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM238C9JI98 176 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 CSTAP01040 98 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 HRASP01112 189 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 TYMSP04818 313 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 ECI1P42126 302 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 DPTQ07507 201 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 DEFB134Q4QY38 66 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 LINC01551Q86U37 167 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 ARHGEF39Q8N4T4 335 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 OR5B12Q96R08 314 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 VAMP8Q9BV40 100 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 MAP1LC3BQ9GZQ8 125 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms