RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 HAGHQ16775 308 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 FIP1L1Q6UN15 594 aaKnown RBP16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 LYZL2Q7Z4W2 148 aa16.92■□□□□ 0.3
SNAPC3-206ENST00000490969 BDP1A6H8Y1 2624 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 A0A087X0M5 115 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 A0A1B0GX30 115 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 OR5H15A6NDH6 313 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 OR5H1A6NKK0 313 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 TSTD3H0UI37 97 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 CYB5BO43169 146 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 TRGC2P03986 189 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 OR5AC1P0C628 307 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 BLKP51451 505 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 CD81P60033 236 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 LSM6P62312 80 aaKnown RBP16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 IL13RA2Q14627 380 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 KISS1Q15726 138 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 RNASE11Q8TAA1 199 aaKnown RBP16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 NPRL2Q8WTW4 380 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF724A8MTY0 619 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 SRP19P09132 144 aaKnown RBP16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 RND3P61587 244 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 OR2AJ1Q8NGZ0 328 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 PRO1933Q9H354 126 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 CHST11Q9NPF2 352 aa16.91■□□□□ 0.3
SNAPC3-206ENST00000490969 CCL1P22362 96 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 ASCL1P50553 236 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 SPSB3Q6PJ21 355 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 CRIP3Q6Q6R5 217 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 DOK3Q7L591 496 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 C6orf201Q7Z4U5 140 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 OR52M1Q8NGK5 317 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 REEP6Q96HR9 211 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 NAA60Q9H7X0 242 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 CA11O75493 328 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF43P17038 809 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 NXPH1P58417 271 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 ARL6IP1Q15041 203 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 FBXW12Q6X9E4 464 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF429Q86V71 674 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 OR13D1Q8NGV5 346 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 TOMM40LQ969M1 308 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 NUDT22Q9BRQ3 303 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 HDHD3Q9BSH5 251 aaPredicted RBP16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 ABHD14AQ9BUJ0 271 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 LIME1Q9H400 295 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 SIRT7Q9NRC8 400 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 SDHAF3Q9NRP4 125 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 RFNGQ9Y644 331 aa16.9■□□□□ 0.3
SNAPC3-206ENST00000490969 CDRT15L2A8MXV6 281 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 STMND1H3BQB6 276 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 ST8SIA3O43173 380 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 PTBP3O95758 552 aaKnown RBP16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 OR5H8P0DN80 308 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 FABP4P15090 132 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 PPA1Q15181 289 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 HIST2H3PS2Q5TEC6 136 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 OR2T2Q6IF00 324 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 FAM57BQ71RH2 274 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 TM2D1Q9BX74 207 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 WWTR1Q9GZV5 400 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 KLHL13Q9P2N7 655 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 ANXA10Q9UJ72 324 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 MMACHCQ9Y4U1 282 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 SEC16AO15027 2179 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 BTBD17A6NE02 478 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 DUSP1P28562 367 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 ALDH3B1P43353 468 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 RTL6Q6ICC9 239 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 OR2G3Q8NGZ4 309 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 RTN4IP1Q8WWV3 396 aaPredicted RBP16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 TMEM234Q8WY98 164 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 TGIF2Q9GZN2 237 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 FSCN3Q9NQT6 498 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 KIAA1456Q9P272 454 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 LIPGQ9Y5X9 500 aa16.89■□□□□ 0.29
SNAPC3-206ENST00000490969 WDFY3Q8IZQ1 3526 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 TMEM225BP0DP42 221 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 TMEM176BQ3YBM2 270 aaPredicted RBP16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 ABCA11PQ4W5N1 156 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 TSPO2Q5TGU0 170 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 OGFOD3Q6PK18 319 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 ZFP62Q8NB50 900 aaPredicted RBP16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 OR8G5Q8NG78 346 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 OR14K1Q8NGZ2 314 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 TVP23CQ96ET8 276 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 UCK1Q9HA47 277 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 IGKV3D-11A0A0A0MRZ8 115 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 CDAP32320 146 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 OR1D4P47884 311 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 GLIPR1P48060 266 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 EWSR1Q01844 656 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 CYB561D1Q8N8Q1 229 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 LRTM2Q8N967 370 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 SLC38A9Q8NBW4 561 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 C18orf12Q96KH6 178 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 ELL3Q9HB65 397 aaPredicted RBP16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 TCFL5Q9UL49 500 aa16.88■□□□□ 0.29
SNAPC3-206ENST00000490969 TRGC1P0CF51 173 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms