RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TBX15Q96SF7 602 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 RNF126Q9BV68 326 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 OSBPL11Q9BXB4 747 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 ACTR6Q9GZN1 396 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 STMN4Q9H169 189 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-204ENST00000471245 ZNF702PQ9H963 129 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 ANKRA2Q9H9E1 313 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 RNF122Q9H9V4 155 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 CES1P1Q9UKY3 287 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 PEX16Q9Y5Y5 336 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 WNK2Q9Y3S1 2297 aa4.11□□□□□ -1.75
CKS1B-204ENST00000471245 AKR7A2O43488 359 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 OR2F2O95006 317 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 IGHV3-23P01764 117 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 SLC35E2BP0CK96 405 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 ACTG1P63261 375 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 BSPH1Q075Z2 132 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 ARL6IP1Q15041 203 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 KIAA0040Q15053 153 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 BCL2A1Q16548 175 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 C11orf71Q6IPW1 123 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 ZNF774Q6NX45 483 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 MED27Q6P2C8 311 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 UQCC3Q6UW78 93 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 Q6ZR54 194 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 GDPD3Q7L5L3 318 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 FNDC9Q8TBE3 224 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 FAM81AQ8TBF8 368 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 RNF138Q8WVD3 245 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 CMTM7Q96FZ5 175 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 TIMD4Q96H15 378 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 SEC22AQ96IW7 307 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 RNF2Q99496 336 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 ZNF184Q99676 751 aaPredicted RBP4.1□□□□□ -1.75
CKS1B-204ENST00000471245 KLHDC3Q9BQ90 382 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 NAT9Q9BTE0 207 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 EFCAB11Q9BUY7 163 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 NMUR2Q9GZQ4 415 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 IQCGQ9H095 443 aaKnown RBP4.1□□□□□ -1.75
CKS1B-204ENST00000471245 VNN3Q9NY84 501 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 MAT2BQ9NZL9 334 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 Q9UF83 564 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 IKZF2Q9UKS7 526 aa4.1□□□□□ -1.75
CKS1B-204ENST00000471245 DPRXA6NFQ7 191 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 NDUFS8O00217 210 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 PGRMC1O00264 195 aaKnown RBP4.09□□□□□ -1.75
CKS1B-204ENST00000471245 AQP8O94778 261 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 PAHP00439 452 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 CRYGCP07315 174 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 CPMP14384 443 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 PSMB1P20618 241 aaKnown RBP4.09□□□□□ -1.75
CKS1B-204ENST00000471245 HTR1FP30939 366 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 CALCRP30988 508 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 P2RY4P51582 365 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 PKNOX1P55347 436 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 RGS8P57771 180 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-204ENST00000471245 DSCR10P59022 87 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 MRPS25P82663 173 aaKnown RBP4.09□□□□□ -1.75
CKS1B-204ENST00000471245 HMGCS1Q01581 520 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 EGFEM1PQ0D2K5 195 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 BIKQ13323 160 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 GGTLC2Q14390 218 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 PON3Q15166 354 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 ALKBH6Q3KRA9 238 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 CDKL4Q5MAI5 379 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 NPSR1Q6W5P4 371 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 UTS2BQ765I0 119 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 CMC1Q7Z7K0 106 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 P2RY8Q86VZ1 359 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 PLCZ1Q86YW0 608 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 TCAIMQ8N3R3 496 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 FBXO36Q8NEA4 188 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 OR6K3Q8NGY3 331 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 ACTRT1Q8TDG2 376 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 S100PBPQ96BU1 408 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 SLC25A38Q96DW6 304 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 GPR22Q99680 433 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 PELOQ9BRX2 385 aaKnown RBP4.09□□□□□ -1.75
CKS1B-204ENST00000471245 ROGDIQ9GZN7 287 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 REEP4Q9H6H4 257 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 NIPAL2Q9H841 368 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 POPDC3Q9HBV1 291 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 ZNF275Q9NSD4 429 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-204ENST00000471245 FAIMQ9NVQ4 179 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 CD274Q9NZQ7 290 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 PSMC3IPQ9P2W1 217 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-204ENST00000471245 SLC7A8Q9UHI5 535 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 TMCO1Q9UM00 188 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 RNF11Q9Y3C5 154 aa4.09□□□□□ -1.75
CKS1B-204ENST00000471245 RPL36Q9Y3U8 105 aaKnown RBP4.09□□□□□ -1.75
CKS1B-204ENST00000471245 KMT2CQ8NEZ4 4911 aaKnown RBP4.09□□□□□ -1.76
CKS1B-204ENST00000471245 UQCRHLA0A096LP55 91 aa4.08□□□□□ -1.76
CKS1B-204ENST00000471245 FAM168BA1KXE4 195 aa4.08□□□□□ -1.76
CKS1B-204ENST00000471245 FAM159BA6NKW6 160 aa4.08□□□□□ -1.76
CKS1B-204ENST00000471245 SUPT3HB4E1H0 165 aa4.08□□□□□ -1.76
CKS1B-204ENST00000471245 H7C417 338 aa4.08□□□□□ -1.76
CKS1B-204ENST00000471245 SS18L1O75177 396 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-204ENST00000471245 GCM2O75603 506 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-204ENST00000471245 LY6HO94772 140 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms