RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ZNF718Q3SXZ3 478 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 CLVS2Q5SYC1 327 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 AWAT2Q6E213 333 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF529Q6P280 563 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 C9orf62Q8N4C0 152 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF611Q8N823 705 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 PHYHIPQ92561 330 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 SLC25A38Q96DW6 304 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 C1orf147Q96MC9 270 aaPredicted RBP8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 MTCH1Q9NZJ7 389 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 COPZ2Q9P299 210 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 RABL2AQ9UBK7 228 aaPredicted RBP8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 RABL2BQ9UNT1 228 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 RNF115Q9Y4L5 304 aa8.08□□□□□ -1.12
HMGCLL1-206ENST00000428842 IGHV3OR15-7A0A075B7D8 119 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 TMEM272A0A1B0GTI8 110 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 A0A1B0GW55 424 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 ANKRD30BLA7E2S9 258 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DUX4L2P0CJ85 424 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DUX4L3P0CJ86 424 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DUX4L4P0CJ87 422 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DUX4L5P0CJ88 424 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DUX4L6P0CJ89 424 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DUX4L7P0CJ90 424 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 VSIG8P0DPA2 414 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 PRF1P14222 555 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 MAPK3P27361 379 aaPredicted RBP8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 HTR2CP28335 458 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 GLRXP35754 106 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 HTR2BP41595 481 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR8G1Q15617 311 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 CD276Q5ZPR3 534 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 TMEM42Q69YG0 159 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DUX4L9Q6RFH8 374 aaPredicted RBP8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZDHHC23Q8IYP9 409 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 FGFRL1Q8N441 504 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR5L1Q8NGL2 311 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 SSC4DQ8WTU2 575 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR5P3Q8WZ94 311 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 ELMOD3Q96FG2 381 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 BORCS8Q96FH0 119 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR2V2Q96R30 315 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 MED28Q9H204 178 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 PLK3Q9H4B4 646 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DUX4Q9UBX2 424 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 KCNN3Q9UGI6 736 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 ATPIF1Q9UII2 106 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 PRRC2AP48634 2157 aaKnown RBP8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 RAI1Q7Z5J4 1906 aaPredicted RBP8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 A0A0A6YYD4 124 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 FAM221AA4D161 298 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 A6NLC8 198 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 J3QKU1 62 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 RAC2P15153 192 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF250P15622 560 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 IGFBP2P18065 325 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 BCL3P20749 454 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 SERPINF1P36955 418 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 PMELP40967 661 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DGCR2P98153 550 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DYRK1AQ13627 763 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 DAZAP2Q15038 168 aaPredicted RBP8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF782Q6ZMW2 699 aaPredicted RBP8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 KRT74Q7RTS7 529 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 CMTM4Q8IZR5 234 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 TOMM5Q8N4H5 51 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR8G5Q8NG78 346 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR11H7Q8NGC8 314 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 ITLN1Q8WWA0 313 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 SNAPC3Q92966 411 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 MRPL24Q96A35 216 aaKnown RBP8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 FAM3DQ96BQ1 224 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 BCL2L14Q9BZR8 327 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 NUDT15Q9NV35 164 aa8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 MRPS28Q9Y2Q9 187 aaKnown RBP8.07□□□□□ -1.12
HMGCLL1-206ENST00000428842 TRAV6A0A075B6T7 132 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 hCG_1807616A0A1W2PRN6 198 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 AIPO00170 330 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 FABP7O15540 132 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 TPD52L2O43399 206 aaKnown RBP8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 TMEM127O75204 238 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 CRTAPO75718 401 aaPredicted RBP8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 MPIG6BO95866 241 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 CYB5R3P00387 301 aaPredicted RBP8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 CD8AP01732 235 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 IGHV1-46P01743 117 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 HPXP02790 462 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 CD3GP09693 182 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 PTGFRP43088 359 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 SNRPD2P62316 118 aaKnown RBP8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 KLF9Q13886 244 aaPredicted RBP8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 UBE2NLQ5JXB2 153 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 SP5Q6BEB4 398 aaPredicted RBP8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 DPPA2Q7Z7J5 298 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 MOGAT3Q86VF5 341 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 SCCPDHQ8NBX0 429 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 DEFB108BQ8NET1 73 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR51F2Q8NH61 342 aa8.06□□□□□ -1.12
HMGCLL1-206ENST00000428842 SMIM4Q8WVI0 70 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms