RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 IGHV2-26A0A0B4J1V2 119 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 FAM90A22PA8MWA6 464 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 EBAG9O00559 213 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 NOS1APO75052 506 aaPredicted RBP10.27□□□□□ -0.77
LINC00339-203ENST00000420503 AMY1AP04745 511 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 AMY2AP04746 511 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 PAICSP22234 425 aaKnown RBP10.27□□□□□ -0.77
LINC00339-203ENST00000420503 PRKACGP22612 351 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 GDNFP39905 211 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 ESRRGP62508 458 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 FLOT2Q14254 428 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 ADGRG5Q8IZF4 528 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 OR4P4Q8NGL7 312 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 OR13D1Q8NGV5 346 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 OR14K1Q8NGZ2 314 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 NDNFQ8TB73 568 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 GIPC3Q8TF64 312 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 UTP4Q969X6 686 aaKnown RBP10.27□□□□□ -0.77
LINC00339-203ENST00000420503 SLAMF9Q96A28 289 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 APOL4Q9BPW4 351 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 MTCH1Q9NZJ7 389 aa10.27□□□□□ -0.77
LINC00339-203ENST00000420503 NUFIP1Q9UHK0 495 aaKnown RBP10.27□□□□□ -0.77
LINC00339-203ENST00000420503 hCG_1809904A0A1W2PP81 198 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 A0A1W2PPE2 198 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 FAM230AA0A1W2PPH8 454 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 A0A1W2PR64 198 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 A0A1W2PRV1 198 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 TCRBV3S1A0A5B6 114 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 PRODHO43272 600 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 DHRS3O75911 302 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 MPZP25189 248 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 DUSP1P28562 367 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 DYNLT3P51808 116 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 SLC35A2P78381 396 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 CDK5Q00535 292 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 ODF4Q2M2E3 257 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 ABCA11PQ4W5N1 156 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 PRAMEF5Q5TYX0 476 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 CENPVQ7Z7K6 275 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF573Q86YE8 665 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF676Q8N7Q3 588 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 CANT1Q8WVQ1 401 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 LRGUKQ96M69 825 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF714Q96N38 554 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 IKZF2Q9UKS7 526 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 V9GYS6 101 aa10.26□□□□□ -0.77
LINC00339-203ENST00000420503 PSPNO60542 156 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 RAP2AP10114 183 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 SNU13P55769 128 aaKnown RBP10.25□□□□□ -0.77
LINC00339-203ENST00000420503 OR12D2P58182 307 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 ROM1Q03395 351 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 CD69Q07108 199 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 FAM98BQ52LJ0 330 aaKnown RBP10.25□□□□□ -0.77
LINC00339-203ENST00000420503 CLVS2Q5SYC1 327 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 SSX6Q7RTT6 188 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 MRPL41Q8IXM3 137 aaKnown RBP10.25□□□□□ -0.77
LINC00339-203ENST00000420503 YIPF3Q9GZM5 350 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 PITPNC1Q9UKF7 332 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 TSSC4Q9Y5U2 329 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-203ENST00000420503 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 RYR2Q92736 4967 aa10.25□□□□□ -0.77
LINC00339-203ENST00000420503 DYNC2H1Q8NCM8 4307 aaKnown RBP10.24□□□□□ -0.77
LINC00339-203ENST00000420503 PRKYO43930 277 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 CHRM2P08172 466 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 UBE2V2Q15819 145 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 SLC35D3Q5M8T2 416 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 GDPD3Q7L5L3 318 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 RNF144BQ7Z419 303 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF329Q86UD4 541 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF679Q8IYX0 411 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 OR8H2Q8N162 312 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 RCC1LQ96I51 464 aaKnown RBP10.24□□□□□ -0.77
LINC00339-203ENST00000420503 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 DUX3Q96PT4 197 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 SLC25A33Q9BSK2 321 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 CHID1Q9BWS9 393 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 MROQ9BYG7 248 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 TMEM133Q9H2Q1 129 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 RBFOX1Q9NWB1 397 aaKnown RBP10.24□□□□□ -0.77
LINC00339-203ENST00000420503 TVP23BQ9NYZ1 205 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 MRM2Q9UI43 246 aaKnown RBP10.24□□□□□ -0.77
LINC00339-203ENST00000420503 POLDIP2Q9Y2S7 368 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 SESN1Q9Y6P5 492 aa10.24□□□□□ -0.77
LINC00339-203ENST00000420503 HUWE1Q7Z6Z7 4374 aaKnown RBP10.24□□□□□ -0.77
LINC00339-203ENST00000420503 LOC110117498-PIK3R3F6TDL0 507 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 CST1P01037 141 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 OSMP13725 252 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 ATP6V1B1P15313 513 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 HOXB6P17509 224 aaKnown RBP10.23□□□□□ -0.77
LINC00339-203ENST00000420503 NPBWR2P48146 333 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 RIDAP52758 137 aaKnown RBP10.23□□□□□ -0.77
LINC00339-203ENST00000420503 CXCR4P61073 352 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 IL24Q13007 206 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF829Q3KNS6 432 aaPredicted RBP10.23□□□□□ -0.77
LINC00339-203ENST00000420503 C9orf152Q5JTZ5 239 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 BCL2L15Q5TBC7 163 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms