RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 ISG15P05161 165 aa13.21□□□□□ -0.3
CYLD-202ENST00000398568 ASAH2BP0C7U1 165 aa13.21□□□□□ -0.3
CYLD-202ENST00000398568 DUSP1P28562 367 aa13.21□□□□□ -0.3
CYLD-202ENST00000398568 EWSR1Q01844 656 aaKnown RBP eCLIP13.21□□□□□ -0.3
CYLD-202ENST00000398568 ABCA11PQ4W5N1 156 aa13.21□□□□□ -0.3
CYLD-202ENST00000398568 LEMD1Q68G75 181 aa13.21□□□□□ -0.3
CYLD-202ENST00000398568 ARHGEF39Q8N4T4 335 aa13.21□□□□□ -0.3
CYLD-202ENST00000398568 SPACA5Q96QH8 159 aa13.21□□□□□ -0.3
CYLD-202ENST00000398568 MRPL22Q9NWU5 206 aaKnown RBP13.21□□□□□ -0.3
CYLD-202ENST00000398568 ZFP30Q9Y2G7 519 aa13.21□□□□□ -0.3
CYLD-202ENST00000398568 MMP9P14780 707 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 ZNF20P17024 532 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 TNFSF10P50591 281 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 ZNF41P51814 821 aaPredicted RBP13.2□□□□□ -0.3
CYLD-202ENST00000398568 MESP2Q0VG99 397 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 ACOT6Q3I5F7 207 aaPredicted RBP13.2□□□□□ -0.3
CYLD-202ENST00000398568 TSLPQ969D9 159 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 GPER1Q99527 375 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 ZNF2Q9BSG1 426 aaPredicted RBP13.2□□□□□ -0.3
CYLD-202ENST00000398568 ZNF701Q9NV72 531 aaPredicted RBP13.2□□□□□ -0.3
CYLD-202ENST00000398568 RHBDD3Q9Y3P4 386 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 RAD51DO75771 328 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 CTSDP07339 412 aaPredicted RBP13.2□□□□□ -0.3
CYLD-202ENST00000398568 GUSBP08236 651 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 PTTG1IPP53801 180 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 HIST1H3AP68431 136 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 NNATQ16517 81 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 SP6Q3SY56 376 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 WDR25Q64LD2 544 aaPredicted RBP13.2□□□□□ -0.3
CYLD-202ENST00000398568 LRP11Q86VZ4 500 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 SFTPA1Q8IWL2 248 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 ADPRHL1Q8NDY3 354 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 C8orf44Q96CB5 159 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 MIEN1Q9BRT3 115 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 KIAA1549LQ6ZVL6 1849 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 DMDP11532 3685 aa13.2□□□□□ -0.3
CYLD-202ENST00000398568 SPINT1O43278 529 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 LCATP04180 440 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 ZNF43P17038 809 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 OMGP23515 440 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 RAB7AP51149 207 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 RBX1P62877 108 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 PSG6Q00889 435 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 LIPHQ8WWY8 451 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 ARRDC3Q96B67 414 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 GNPNAT1Q96EK6 184 aaPredicted RBP13.19□□□□□ -0.3
CYLD-202ENST00000398568 MS4A10Q96PG2 267 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 ZNF248Q8NDW4 579 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 OR10G4Q8NGN3 311 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 RNASE8Q8TDE3 154 aaKnown RBP13.19□□□□□ -0.3
CYLD-202ENST00000398568 TMEM170AQ8WVE7 144 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 COX14Q96I36 57 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 VN1R1Q9GZP7 353 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 LRIT1Q9P2V4 623 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 FBLN5Q9UBX5 448 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 A0A0A6YYD4 124 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 LOC102723971A0A1B0GUV8 181 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 PRSS37A4D1T9 235 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 CRYM-AS1A6NIL9 109 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 ZFP92A6NM28 416 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 K7EQS6 105 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 RANP62826 216 aaKnown RBP13.19□□□□□ -0.3
CYLD-202ENST00000398568 RAC1P63000 192 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 SDF2L1Q9HCN8 221 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 CHST11Q9NPF2 352 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 G6PC2Q9NQR9 355 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 FOXJ2Q9P0K8 574 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 KNL1Q8NG31 2342 aa13.19□□□□□ -0.3
CYLD-202ENST00000398568 DNAH14Q0VDD8 3507 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 ADIRFQ15847 76 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 KLHL24Q6TFL4 600 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 TGIF2LYQ8IUE0 185 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 OR2C3Q8N628 320 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 OR51T1Q8NGJ9 327 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 PCED1AQ9H1Q7 454 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 IL6RP08887 468 aaPredicted RBP13.18□□□□□ -0.3
CYLD-202ENST00000398568 PDLIM4P50479 330 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 TMEM50BP56557 158 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 ADAMTSL4Q6UY14 1074 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 COMMD2Q86X83 199 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 REEP6Q96HR9 211 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 WFIKKN1Q96NZ8 548 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 SERINC1Q9NRX5 453 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 LANCL2Q9NS86 450 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 CHRNB4P30926 498 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 TFPI2P48307 235 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 PIGPP57054 158 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 FAM3BP58499 235 aaPredicted RBP13.18□□□□□ -0.3
CYLD-202ENST00000398568 RNF151Q2KHN1 245 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 NUFIP2Q7Z417 695 aaKnown RBP13.18□□□□□ -0.3
CYLD-202ENST00000398568 LYZL2Q7Z4W2 148 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 ATG4DQ86TL0 474 aaPredicted RBP13.18□□□□□ -0.3
CYLD-202ENST00000398568 FBXL14Q8N1E6 418 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 OR4C3Q8NH37 302 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 NT5CQ8TCD5 201 aa13.18□□□□□ -0.3
CYLD-202ENST00000398568 ADAT3Q96EY9 351 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms