RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 ACAA1P09110 424 aaPredicted RBP17■□□□□ 0.31
RCCD1-201ENST00000394258 PIGYQ3MUY2 71 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 RPUSD3Q6P087 351 aaKnown RBP17■□□□□ 0.31
RCCD1-201ENST00000394258 PRSS54Q6PEW0 395 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 SKA3Q8IX90 412 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 METTL9Q9H1A3 318 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 LIME1Q9H400 295 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17■□□□□ 0.31
RCCD1-201ENST00000394258 SHANK1Q9Y566 2161 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 CST2P09228 141 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 ZNF806P0C7X5 589 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 ZNF92Q03936 586 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 POC1AQ8NBT0 407 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 SLC30A7Q8NEW0 376 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 EMG1Q92979 244 aaKnown RBP16.99■□□□□ 0.31
RCCD1-201ENST00000394258 BORCS8Q96FH0 119 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 THOC3Q96J01 351 aaKnown RBP16.99■□□□□ 0.31
RCCD1-201ENST00000394258 FAM96BQ9Y3D0 163 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 PRRC2CQ9Y520 2896 aaKnown RBP16.99■□□□□ 0.31
RCCD1-201ENST00000394258 ZNF705EA8MWA4 302 aaPredicted RBP16.99■□□□□ 0.31
RCCD1-201ENST00000394258 PDZK1IP1Q13113 114 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 CPT1CQ8TCG5 803 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 GLYATL2Q8WU03 294 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 AK3Q9UIJ7 227 aa16.99■□□□□ 0.31
RCCD1-201ENST00000394258 C14orf166Q9Y224 244 aaKnown RBP16.99■□□□□ 0.31
RCCD1-201ENST00000394258 B4E171 279 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 FARS2O95363 451 aaKnown RBP16.98■□□□□ 0.31
RCCD1-201ENST00000394258 NRASP01111 189 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 RCC1P18754 421 aaPredicted RBP16.98■□□□□ 0.31
RCCD1-201ENST00000394258 TSPAN7P41732 249 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 RBP2P50120 134 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 ZXDAP98168 799 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 PIGCQ92535 297 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 ADGRG7Q96K78 797 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 C2orf50Q96LR7 162 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 HES7Q9BYE0 225 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 WNT5BQ9H1J7 359 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 LRFN1Q9P244 771 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 ZNF629Q9UEG4 869 aaPredicted RBP16.98■□□□□ 0.31
RCCD1-201ENST00000394258 PCSK5Q92824 1860 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 MEX3AA1L020 520 aaKnown RBP16.98■□□□□ 0.31
RCCD1-201ENST00000394258 GEMIN2O14893 280 aaKnown RBP16.98■□□□□ 0.31
RCCD1-201ENST00000394258 CELA3AP09093 270 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 FAM157CP0CG43 387 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 GLI4P10075 376 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 CCNOP22674 350 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 RBM39Q14498 530 aaKnown RBP16.98■□□□□ 0.31
RCCD1-201ENST00000394258 LURAP1LQ8IV03 231 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 SULF2Q8IWU5 870 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 PSMF1Q92530 271 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 TOMM40LQ969M1 308 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 OR2H1Q9GZK4 316 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 TIMM10BQ9Y5J6 103 aa16.98■□□□□ 0.31
RCCD1-201ENST00000394258 IGKV1-12A0A0C4DH73 117 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 IGKV1D-12P01611 117 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 IGHEP01854 428 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 JMJD7P0C870 316 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 SSPNQ14714 243 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 OR2A2Q6IF42 318 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 Q6ZSR3 168 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 SPAG16Q8N0X2 631 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 DEFB123Q8N688 67 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 OR4A4PQ8NGN8 299 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 SPSB1Q96BD6 273 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 C10orf35Q96D05 121 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 SULT4A1Q9BR01 284 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 GPR35Q9HC97 309 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 MED13Q9UHV7 2174 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 TRBV23-1A0A0A0MS06 115 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 OR6C6A6NF89 314 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 ZNF850A8MQ14 1090 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 CD79AP11912 226 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 AKR1C3P42330 323 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 RPL7L1Q6DKI1 246 aaKnown RBP16.97■□□□□ 0.31
RCCD1-201ENST00000394258 CCDC36Q8IYA8 594 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 FBXL14Q8N1E6 418 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 ARRDC1-AS1Q9H2J1 176 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 TMEM100Q9NV29 134 aa16.97■□□□□ 0.31
RCCD1-201ENST00000394258 A0A096LPE4 126 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 A0A1W2PPZ6 126 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 ZNF587BE7ETH6 402 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 DNPH1O43598 174 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 OR5H8P0DN80 308 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 HOXB1P14653 301 aaPredicted RBP16.96■□□□□ 0.31
RCCD1-201ENST00000394258 IL15RAQ13261 267 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 MST1LQ2TV78 715 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 CDCP2Q5VXM1 449 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 CLEC9AQ6UXN8 241 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 ETV3LQ6ZN32 361 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 ANXA10Q9UJ72 324 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 SERPINA7P05543 415 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 CCL2P13500 99 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 FXYD4P59646 89 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 FAM3AP98173 230 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 SPEM2Q0P670 501 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 EIF3IQ13347 325 aaKnown RBP16.96■□□□□ 0.31
RCCD1-201ENST00000394258 CNN3Q15417 329 aaKnown RBP16.96■□□□□ 0.31
RCCD1-201ENST00000394258 SP6Q3SY56 376 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 TSPO2Q5TGU0 170 aa16.96■□□□□ 0.31
RCCD1-201ENST00000394258 RNF141Q8WVD5 230 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms