RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 FBXW12Q6X9E4 464 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 ARHGEF39Q8N4T4 335 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 STT3BQ8TCJ2 826 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 GPR173Q9NS66 373 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 FAM24AA6NFZ4 105 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 H0Y8X5 98 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 OPN1MWP04001 364 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 OPN1MW2P0DN77 364 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 OPN1MW3P0DN78 364 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF823P16415 610 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 KIR2DL1P43626 348 aaPredicted RBP18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 POLR2HP52434 150 aaKnown RBP18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 DMRTC1Q5HYR2 192 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 WDR25Q64LD2 544 aaPredicted RBP18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF705AQ6ZN79 300 aaPredicted RBP18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 FBXL14Q8N1E6 418 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 OR10G6Q8NH81 332 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 FLVCR1-AS1Q8TAF5 88 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 CALHM2Q9HA72 323 aa18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 POLR3KQ9Y2Y1 108 aaPredicted RBP18.02■□□□□ 0.47
TMEFF1-201ENST00000374879 TGFBR3LH3BV60 316 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 IFI6P09912 130 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 ELLP55199 621 aaPredicted RBP18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 C1orf189Q5VU69 101 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 FIGLAQ6QHK4 219 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 C9orf40Q8IXQ3 194 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 TMEM123Q8N131 208 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 TSACCQ96A04 125 aaPredicted RBP18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF701Q9NV72 531 aaPredicted RBP18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 FAM206AQ9NX38 181 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 PRUNE2Q8WUY3 3088 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 M0QZK8 103 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 ST8SIA3O43173 380 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 GGCTO75223 188 aaKnown RBP18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 OMGP23515 440 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 PIGPP57054 158 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 COTL1Q14019 142 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 TSPO2Q5TGU0 170 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 FNDC7Q5VTL7 733 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF66Q6ZN08 573 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF283Q8N7M2 679 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 OR51T1Q8NGJ9 327 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 POC1BQ8TC44 478 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 GPR84Q9NQS5 396 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 SLC7A11Q9UPY5 501 aa18.01■□□□□ 0.47
TMEFF1-201ENST00000374879 SCGB1D1O95968 90 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 IRF2P14316 349 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF43P17038 809 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 TMEM187Q14656 261 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 OR14L1PQ8NHC6 308 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 C16orf52Q8NHV5 167 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 BOD1Q96IK1 185 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 KIR2DL5BA0A0G2JN68 375 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 KIR2DL5BA0A0G2JPC4 375 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 CA11O75493 328 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 FMODQ06828 376 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 KIR2DS3Q14952 304 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 TMEM196Q5HYL7 178 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 KIR2DL5AQ8N109 375 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 OR5AS1Q8N127 324 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 TMEM18Q96B42 140 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 WFIKKN1Q96NZ8 548 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 RPP25Q9BUL9 199 aaKnown RBP18■□□□□ 0.47
TMEFF1-201ENST00000374879 PBOV1Q9GZY1 135 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 OR10A2Q9H208 303 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 TXNIPQ9H3M7 391 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 IGFLR1Q9H665 355 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 CHST11Q9NPF2 352 aa18■□□□□ 0.47
TMEFF1-201ENST00000374879 ETV2O00321 342 aaPredicted RBP17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 HPNP05981 417 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 PVRP15151 417 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 TSPAN7P41732 249 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF266Q14584 549 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 LRP11Q86VZ4 500 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 TMEM171Q8WVE6 324 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 TPSD1Q9BZJ3 242 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 LPAR2Q9HBW0 351 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 DOCK8Q8NF50 2099 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 C17orf51A8MQB3 221 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF205O95201 554 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 SELEP16581 610 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 ZNF20P17024 532 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 SFTPDP35247 375 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 CSNK1A1P48729 337 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 PNRC1Q12796 327 aaPredicted RBP17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 CLN3Q13286 438 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 SLC26A10Q8NG04 563 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 FGF14Q92915 247 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 RERGQ96A58 199 aaPredicted RBP17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 LIME1Q9H400 295 aa17.99■□□□□ 0.47
TMEFF1-201ENST00000374879 LOC102723971A0A1B0GUV8 181 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 PDLIM4P50479 330 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 SLC37A1P57057 533 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 RUNX1Q01196 453 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 OR5L2Q8NGL0 311 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 OR51E1Q8TCB6 317 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 FAM3CQ92520 227 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 RBMXL1Q96E39 390 aaKnown RBP17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 URM1Q9BTM9 101 aaKnown RBP17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 SDF2L1Q9HCN8 221 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms