RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MLNRO43193 412 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 LYRM1O43325 122 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 AKR7A2O43488 359 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 LANCL1O43813 399 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 LPLP06858 475 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 PTHLHP12272 177 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 HIST1H1DP16402 221 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 MPZP25189 248 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 ACTBP60709 375 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 ACTG1P63261 375 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 PNLIPRP3Q17RR3 467 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 MSMPQ1L6U9 139 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 NCMAPQ5T1S8 102 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 ELP2Q6IA86 826 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 SPNS3Q6ZMD2 512 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 Q6ZNX1 250 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 Q6ZTK2 550 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 GPX8Q8TED1 209 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 AQP3Q92482 292 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 MRPL24Q96A35 216 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 SYT3Q9BQG1 590 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 C11orf54Q9H0W9 315 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 RHOFQ9HBH0 211 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 TAS2R8Q9NYW2 309 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 MTFP1Q9UDX5 166 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 POU2F3Q9UKI9 436 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 CACNG2Q9Y698 323 aa11.78□□□□□ -0.52
PDLIM5-203ENST00000359265 A0A1B0GWJ7 208 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 PLSCR5A0PG75 271 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 MEIOCA2RUB1 952 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 TMEM235A6NFC5 223 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 VSTM5A8MXK1 200 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 H0YL77 283 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 PLA2G10O15496 165 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 ORC5O43913 435 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 RBBP9O75884 186 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 CD3EP07766 207 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 SFTPBP07988 381 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 BCL3P20749 454 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 GABRR1P24046 479 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 BLVRBP30043 206 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 RBM11P57052 281 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 GNG2P59768 71 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 FGF12P61328 243 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 GUCA2AQ02747 115 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 DYRK1AQ13627 763 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 KLF9Q13886 244 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 CDNFQ49AH0 187 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 Q6ZR03 302 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 WDR86Q86TI4 376 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 FBXL14Q8N1E6 418 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 Q8NFD4 153 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 OR10AD1Q8NGE0 317 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 ENKURQ8TC29 256 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 PLPPR2Q96GM1 343 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 MSL2Q9HCI7 577 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 CA10Q9NS85 328 aa11.77□□□□□ -0.53
PDLIM5-203ENST00000359265 CADP27708 2225 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A10PA6NDY2 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A18PA6NE21 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A16PA6NEW6 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A20PA6NIJ5 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A8PA6NJQ4 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A7PA6NKC0 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A22PA8MWA6 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A12PA8MX19 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A5PA8MXJ8 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A23PA8MXZ1 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 MFNGO00587 321 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 SYNGR1O43759 233 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 MELTFP08582 738 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 CSF1P09603 554 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A15PP0C7V4 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A13PP0C7W8 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A14PP0C7W9 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM90A24PP0C7X0 464 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 GNB3P16520 340 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 SRP9P49458 86 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 ZNF154Q13106 437 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 BEX5Q5H9J7 111 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 FAM76BQ5HYJ3 339 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 ADAM5Q6NVV9 412 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 LRP11Q86VZ4 500 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 Q8IYB0 196 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 SCCPDHQ8NBX0 429 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 LINC01560Q8TB33 94 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 DEDD2Q8WXF8 326 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 ARHGAP5-AS1Q96IT6 56 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 PLK3Q9H4B4 646 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 ZMAT3Q9HA38 289 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 MTCH1Q9NZJ7 389 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 TAAR3PQ9P1P4 343 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 KLK11Q9UBX7 282 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 ST3GAL6Q9Y274 331 aa11.76□□□□□ -0.53
PDLIM5-203ENST00000359265 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 ANKRD20A5PA0PJZ0 165 aa11.75□□□□□ -0.53
PDLIM5-203ENST00000359265 A6NLC8 198 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms