RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 RNASE10Q5GAN6 216 aaKnown RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 UNQ6494/PRO21346Q6UXR6 183 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 LRP11Q86VZ4 500 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 OR4K15Q8NH41 348 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 DEDD2Q8WXF8 326 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 DACT3Q96B18 629 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 WDR89Q96FK6 387 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 HIST1H2AAQ96QV6 131 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 OR51I2Q9H344 312 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 UBE2QL1A1L167 161 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 IQCF6A8MYZ5 107 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 J3QW42 95 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 SDCBPO00560 298 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 ATXN7O15265 892 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 ZNF205O95201 554 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 MECP2P51608 486 aaKnown RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 GLDNQ6ZMI3 551 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 ZSCAN4Q8NAM6 433 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 OBP2BQ9NPH6 170 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 ZNF107Q9UII5 783 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 PLCE1Q9P212 2302 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 OR7C1O76099 320 aaPredicted RBP11.56□□□□□ -0.56
CDC42-202ENST00000344548 OPRM1P35372 400 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 GNG3P63215 75 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 ATPAF1Q5TC12 328 aaPredicted RBP11.56□□□□□ -0.56
CDC42-202ENST00000344548 HOGA1Q86XE5 327 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 GTF3AQ92664 365 aaKnown RBP11.56□□□□□ -0.56
CDC42-202ENST00000344548 MED28Q9H204 178 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 MSL2Q9HCI7 577 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 PURGQ9UJV8 347 aaKnown RBP11.56□□□□□ -0.56
CDC42-202ENST00000344548 VSIG4Q9Y279 399 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 AMDHD2Q9Y303 409 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 ROS1P08922 2347 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 PKD1L2Q7Z442 2459 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 A0A1B0GUH1 482 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 SERPINE3A8MV23 424 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 GMFBP60983 142 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 ZNF154Q13106 437 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 LY6DQ14210 128 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 FAM189A2Q15884 450 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 FAM76BQ5HYJ3 339 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 TMEM200AQ86VY9 491 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
CDC42-202ENST00000344548 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
CDC42-202ENST00000344548 ZNF701Q9NV72 531 aaPredicted RBP11.56□□□□□ -0.56
CDC42-202ENST00000344548 TUBD1Q9UJT1 453 aa11.56□□□□□ -0.56
CDC42-202ENST00000344548 FGF12P61328 243 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 PPA1Q15181 289 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 C2orf68Q2NKX9 166 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 TMED4Q7Z7H5 227 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 SCCPDHQ8NBX0 429 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 MRPS24Q96EL2 167 aaKnown RBP11.55□□□□□ -0.56
CDC42-202ENST00000344548 CA10Q9NS85 328 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 HSF4Q9ULV5 492 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 MED19A0JLT2 244 aaPredicted RBP11.55□□□□□ -0.56
CDC42-202ENST00000344548 OR5B21A6NL26 309 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 F5H5P2 479 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 HSPB6O14558 160 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 CDIPTO14735 213 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 AKR7A2O43488 359 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 MPZP25189 248 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 MAB21L1Q13394 359 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 SNTB1Q13884 538 aaKnown RBP11.55□□□□□ -0.56
CDC42-202ENST00000344548 KCNJ8Q15842 424 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 ELP2Q6IA86 826 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 ZNF826PQ6ZT77 177 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 FAM169BQ8N8A8 192 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 LIME1Q9H400 295 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
CDC42-202ENST00000344548 ATP6V1G2-DDX39BF2Z307 99 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 GRPP07492 148 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 PRKACAP17612 351 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 AMY2BP19961 511 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 SPRNQ5BIV9 151 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 MRGPRGQ86SM5 289 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 ZNF573Q86YE8 665 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 C11orf53Q8IXP5 236 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 SAXO1Q8IYX7 474 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 MUC20Q8N307 709 aaPredicted RBP11.54□□□□□ -0.56
CDC42-202ENST00000344548 OR8G5Q8NG78 346 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 DMRTA2Q96SC8 542 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 CMSS1Q9BQ75 279 aaKnown RBP11.54□□□□□ -0.56
CDC42-202ENST00000344548 SLC2A8Q9NY64 477 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 JKAMPQ9P055 326 aa11.54□□□□□ -0.56
CDC42-202ENST00000344548 TRGV8A0A0C4DH27 118 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 TMEM82A0PJX8 343 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 TRAPPC2LH3BP13 241 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 SSNA1O43805 119 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 PDCD6O75340 191 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 SULT1A3P0DMM9 295 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 SULT1A4P0DMN0 295 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 KLRB1Q12918 225 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 IL24Q13007 206 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 MEF2DQ14814 521 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 MPPED2Q15777 294 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 ZNF626Q68DY1 528 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 VHLLQ6RSH7 139 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 MKXQ8IYA7 352 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 MUCL1Q96DR8 90 aa11.53□□□□□ -0.56
CDC42-202ENST00000344548 ZNF69Q9UC07 566 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms