RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 CCNOP22674 350 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 ERP29P30040 261 aaKnown RBP6.1□□□□□ -1.43
NUP43-201ENST00000340413 MPV17P39210 176 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 UCP3P55916 312 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 TAS2R31P59538 309 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 GNG2P59768 71 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 CR1LQ2VPA4 569 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 SMIM21Q3B7S5 101 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 Q3ZCU0 254 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 ATPAF1Q5TC12 328 aaPredicted RBP6.1□□□□□ -1.43
NUP43-201ENST00000340413 OR2T2Q6IF00 324 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 GDPD3Q7L5L3 318 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 BIVMQ86UB2 503 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 TMEM17Q86X19 198 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 OR52I2Q8NH67 350 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 PPP1R35Q8TAP8 253 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 ENKURQ8TC29 256 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 EGLN1Q9GZT9 426 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 MS4A5Q9H3V2 200 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 HRASLSQ9HDD0 168 aa6.1□□□□□ -1.43
NUP43-201ENST00000340413 HCFC1P51610 2035 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 PIEZO2Q9H5I5 2752 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 FUOMA2VDF0 154 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 SNRPGP15A8MWD9 76 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 SRRM5B3KS81 715 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 SHISA9B4DS77 424 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 DGCR2P98153 550 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 HLXQ14774 488 aaPredicted RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 ITLN2Q8WWU7 325 aaPredicted RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 ZNF486Q96H40 463 aaPredicted RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 C11orf54Q9H0W9 315 aaPredicted RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 MCUBQ9NWR8 336 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 SCP2D1Q9UJQ7 156 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 RAI1Q7Z5J4 1906 aaPredicted RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 MED12Q93074 2177 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 A0A0B4J2A0 478 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 IGKV1-12A0A0C4DH73 117 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 KIR2DS1A0A191URI9 304 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 PLSCR5A0PG75 271 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 CLEC18AA5D8T8 446 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 SH2D1BO14796 132 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 MLNRO43193 412 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 NDUFA2O43678 99 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 NDUFB6O95139 128 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 IGKV1D-12P01611 117 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 KIR2DS4P43632 304 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 TMEM50BP56557 158 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 CLDN12P56749 244 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 KIR2DS1Q14954 304 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 RBMS2Q15434 407 aaKnown RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 ZNF672Q499Z4 452 aaPredicted RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 SLC35E4Q6ICL7 350 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 CLEC18BQ6UXF7 455 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 DMRTC2Q8IXT2 367 aaPredicted RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 SCCPDHQ8NBX0 429 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 CLEC18CQ8NCF0 446 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 OR10A7Q8NGE5 316 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 CA5BP1Q8WTZ4 195 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 MEGF10Q96KG7 1140 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 WFIKKN1Q96NZ8 548 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 SELENOIQ9C0D9 397 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 SHPKQ9UHJ6 478 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 WIPI2Q9Y4P8 454 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 A0A0B4J203 849 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 ITGB1BP1O14713 200 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 HTR3BO95264 441 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 NAPSAO96009 420 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 DHFRP00374 187 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 CD3GP09693 182 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 MUC1P15941 1255 aaPredicted RBP6.09□□□□□ -1.43
NUP43-201ENST00000340413 HAAOP46952 286 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 Q6P435 159 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 C11orf88Q6PI97 169 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 DTX2Q86UW9 622 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 C11orf53Q8IXP5 236 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 C1orf87Q8N0U7 546 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 CA10Q9NS85 328 aa6.09□□□□□ -1.43
NUP43-201ENST00000340413 ZNF407Q9C0G0 2248 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 BTCP35070 178 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 GPM6AP51674 278 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 SWI5Q1ZZU3 235 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 ZNF57Q68EA5 555 aaPredicted RBP6.08□□□□□ -1.44
NUP43-201ENST00000340413 STEAP1BQ6NZ63 245 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 PLET1Q6UQ28 207 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 SLC25A26Q70HW3 274 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 FJX1Q86VR8 437 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 CCDC107Q8WV48 283 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 NEU4Q8WWR8 484 aaPredicted RBP6.08□□□□□ -1.44
NUP43-201ENST00000340413 CABLES2Q9BTV7 478 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 OCEL1Q9H607 264 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 C12orf4Q9NQ89 552 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 IFT46Q9NQC8 304 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 MTCH1Q9NZJ7 389 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 FAM221AA4D161 298 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 ZNF736B4DX44 427 aaPredicted RBP6.08□□□□□ -1.44
NUP43-201ENST00000340413 SSX5O60225 188 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 PAX1P15863 534 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 CA6P23280 308 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 VEGFCP49767 419 aa6.08□□□□□ -1.44
NUP43-201ENST00000340413 BSPH1Q075Z2 132 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms