RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 UMAD1C9J7I0 102 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 PPP1R2P9O14990 202 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 NRASP01111 189 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 FOSL1P15407 271 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 MPGP29372 298 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 MMP16P51512 607 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 GPM6AP51674 278 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 TMEM33P57088 247 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 PLPPR5Q32ZL2 321 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 FNDC7Q5VTL7 733 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 GGNBP1Q5YKI7 109 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 OR5AP2Q8NGF4 316 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 OR10D4PQ8NGN7 298 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 RXFP4Q8TDU9 374 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 FAM206AQ9NX38 181 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 ARHGAP21Q5T5U3 1957 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 LINC00587B1AMM8 73 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 E9PLN8 166 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 DUS4LO95620 317 aaKnown RBP10.47□□□□□ -0.73
USP1-201ENST00000339950 ACTL6AO96019 429 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 FGF2P09038 288 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 TAGLN2P37802 199 aaKnown RBP10.47□□□□□ -0.73
USP1-201ENST00000339950 NHLH2Q02577 135 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 ISXQ2M1V0 245 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 MIDNQ504T8 468 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 PHYHD1Q5SRE7 291 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 POM121Q96HA1 1249 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 TIMM8BQ9Y5J9 83 aaPredicted RBP10.47□□□□□ -0.73
USP1-201ENST00000339950 TUBAL3A6NHL2 446 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 WDR1O75083 606 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 IAPPP10997 89 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 SELEP16581 610 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 IGLV3-21P80748 117 aaPredicted RBP10.47□□□□□ -0.73
USP1-201ENST00000339950 RIPPLY1Q0D2K3 151 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 SHBQ15464 509 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 THOC3Q96J01 351 aaKnown RBP10.47□□□□□ -0.73
USP1-201ENST00000339950 OCSTAMPQ9BR26 566 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 HES7Q9BYE0 225 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 C1orf123Q9NWV4 160 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 NOSIPQ9Y314 301 aaKnown RBP10.47□□□□□ -0.73
USP1-201ENST00000339950 ZNF106Q9H2Y7 1883 aaKnown RBP10.47□□□□□ -0.73
USP1-201ENST00000339950 RNF222A6NCQ9 220 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 H0YIZ8 118 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 GP1BAP07359 652 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 MDKP21741 143 aaPredicted RBP10.47□□□□□ -0.73
USP1-201ENST00000339950 RBP2P50120 134 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 RAB5CP51148 216 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 TAS2R46P59540 309 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 POLR2GP62487 172 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP1-201ENST00000339950 SHEQ5VZ18 495 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 GCNT2Q8N0V5 402 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 SLC30A7Q8NEW0 376 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 HINT2Q9BX68 163 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 NELFAQ9H3P2 528 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 CUL9Q8IWT3 2517 aa10.47□□□□□ -0.73
USP1-201ENST00000339950 A0A0G2JMM0 328 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 A0A1W2PPB8 328 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 A0A1W2PRS3 328 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 ZFP92A6NM28 416 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 KIR3DP1A8MWS1 328 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 OR2C1O95371 312 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 GRPP07492 148 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 CD63P08962 238 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 MRPS34P82930 218 aaKnown RBP10.46□□□□□ -0.73
USP1-201ENST00000339950 ROM1Q03395 351 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 HAS2Q92819 552 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 SDSLQ96GA7 329 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 A0A0A6YYD4 124 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 PTAFRP25105 342 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 MLF1P58340 268 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 SPINK9Q5DT21 86 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 TEX30Q5JUR7 227 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 LCN15Q6UWW0 184 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 CNEP1R1Q8N9A8 125 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 OR8U1Q8NH10 309 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
USP1-201ENST00000339950 PECRQ9BY49 303 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 MCTS1Q9ULC4 181 aaKnown RBP10.46□□□□□ -0.73
USP1-201ENST00000339950 FZR1Q9UM11 496 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 PPP1R3CQ9UQK1 317 aa10.46□□□□□ -0.73
USP1-201ENST00000339950 C2orf16Q68DN1 1984 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 A0A1W2PPH5 198 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 A8MXK9 166 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 RNASEK-C17orf49H0YIS7 233 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 TRAF3IP2O43734 574 aaPredicted RBP10.46□□□□□ -0.74
USP1-201ENST00000339950 ELLP55199 621 aaPredicted RBP10.46□□□□□ -0.74
USP1-201ENST00000339950 ABHD17BQ5VST6 288 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 OVCH2Q7RTZ1 564 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 NECAP1Q8NC96 275 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 MEGF10Q96KG7 1140 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 C2orf50Q96LR7 162 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 RAB33BQ9H082 229 aa10.46□□□□□ -0.74
USP1-201ENST00000339950 IGKV3D-11A0A0A0MRZ8 115 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 IFNA10P01566 189 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 IFNA4P05014 189 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 CD1AP06126 327 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 MUC1P15941 1255 aaPredicted RBP10.45□□□□□ -0.74
USP1-201ENST00000339950 SLC23A3Q6PIS1 610 aa10.45□□□□□ -0.74
USP1-201ENST00000339950 ZNF808Q8N4W9 903 aaPredicted RBP10.45□□□□□ -0.74
USP1-201ENST00000339950 OR2M3Q8NG83 312 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms