RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TINAGL1Q9GZM7 467 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RAB6CQ9H0N0 254 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MTHFD2LQ9H903 347 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SERHLQ9NQF3 203 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 FARSBQ9NSD9 589 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MRPL27Q9P0M9 148 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MDFICQ9P1T7 246 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MARCH4Q9P2E8 410 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF230Q9UIE0 474 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 EMCNQ9ULC0 261 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RNF150Q9ULK6 438 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TBC1D24Q9ULP9 559 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PYCARDQ9ULZ3 195 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PIGLQ9Y2B2 252 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SAMHD1Q9Y3Z3 626 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ARL5AQ9Y689 179 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 BOD1L1Q8NFC6 3051 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CELSR1Q9NYQ6 3014 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 A0A087WUJ7 227 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 FAM172BPA6NC97 362 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 ANKRD30BLA7E2S9 258 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 BUD23O43709 281 aaKnown RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 PEX11AO75192 247 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 CCNKO75909 580 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 OR5F1O95221 314 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 APOL3O95236 402 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 KRT75O95678 551 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF682O95780 498 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 PF4P02776 101 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 BPGMP07738 259 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 MGAT1P26572 445 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 DUSP1P28562 367 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 NTSP30990 170 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 HSD17B3P37058 310 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 HPCAL1P37235 193 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 ACAA2P42765 397 aaKnown RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 GSK3BP49841 420 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 CD81P60033 236 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 TSPAN5P62079 268 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 PPP1CBP62140 327 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 ELF3P78545 371 aaPredicted RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 SLC13A2Q13183 592 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 CASP8Q14790 479 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 MEF2DQ14814 521 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 KCTD19Q17RG1 926 aaPredicted RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 TIGITQ495A1 244 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 CCDC58Q4VC31 144 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 TRMT12Q53H54 448 aaKnown RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 C10orf91Q5T1B1 145 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 TSPO2Q5TGU0 170 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 MZT2BQ6NZ67 158 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF621Q6ZSS3 439 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 MAVSQ7Z434 540 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 GOLGA7Q7Z5G4 137 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 DENND6AQ8IWF6 608 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 FAM185AQ8N0U4 392 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 BCL6BQ8N143 479 aaPredicted RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 ARFGAP2Q8N6H7 521 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 FAM71DQ8N9W8 422 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 GJC3Q8NFK1 279 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 OR1N2Q8NGR9 330 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 OR13C4Q8NGS5 318 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 FAM110DQ8TAY7 271 aaPredicted RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 KLF14Q8TD94 323 aaPredicted RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 JADE3Q92613 823 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 THRSPQ92748 146 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 NEUROG1Q92886 237 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 SH3YL1Q96HL8 342 aaPredicted RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 PPM1MQ96MI6 270 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 TSNARE1Q96NA8 513 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 KCNA7Q96RP8 456 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 TEAD3Q99594 435 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 ALKBH7Q9BT30 221 aaPredicted RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 C1QTNF4Q9BXJ3 329 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 MROQ9BYG7 248 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 GAL3ST2Q9H3Q3 398 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 GORASP2Q9H8Y8 452 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 RANGRFQ9HD47 186 aaPredicted RBP1.09□□□□□ -2.23
LINC00643-201ENST00000334389 SAR1AQ9NR31 198 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 C1orf109Q9NX04 203 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 PTTG3PQ9NZH4 202 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 VPS29Q9UBQ0 182 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 CTSZQ9UBR2 303 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 CYB5R1Q9UHQ9 305 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM5Q9Y2B1 443 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 CUBNO60494 3623 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 F5P12259 2224 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 USF3Q68DE3 2245 aa1.09□□□□□ -2.23
LINC00643-201ENST00000334389 FREM1Q5H8C1 2179 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM72A0PK05 275 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 C5orf52A6NGY3 159 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 OR2AT4A6NND4 320 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 A8MT66 165 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 SEC14L6B5MCN3 397 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 NPIPB6E9PJ23 425 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 RS1O15537 224 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 AKR7A2O43488 359 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 STX11O75558 287 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 FCN3O75636 299 aa1.09□□□□□ -2.24
LINC00643-201ENST00000334389 PLGP00747 810 aaPredicted RBP1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms