RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ATG4DQ86TL0 474 aaPredicted RBP12.36□□□□□ -0.43
PRKCB-201ENST00000303531 OR2C3Q8N628 320 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 VSTM2LQ96N03 204 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 NARFLQ9H6Q4 476 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 OR6X1Q8NH79 312 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 OR2D2Q9H210 308 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 HMSDA8MTL9 139 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 K7EQS6 105 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 FABP4P15090 132 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 SRD5A2P31213 254 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 ZNF66Q6ZN08 573 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 CARFQ8N187 725 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 CTDSPLO15194 276 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 HRASP01112 189 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 SSPNQ14714 243 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 SLC36A1Q7Z2H8 476 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
PRKCB-201ENST00000303531 ADAP1O75689 374 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 IL13RA2Q14627 380 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 OR13G1Q8NGZ3 307 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 PHYHIPLQ96FC7 376 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 WNT16Q9UBV4 365 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 ICAM5Q9UMF0 924 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 IGHV3-43A0A0B4J1X8 118 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 IGHV3-43DP0DP04 118 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 EPHA8P29322 1005 aaPredicted RBP12.35□□□□□ -0.43
PRKCB-201ENST00000303531 SPINK9Q5DT21 86 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 OR10AC1Q8NH08 325 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
PRKCB-201ENST00000303531 TMEM56Q96MV1 263 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 MIXL1Q9H2W2 232 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 MT-CO3P00414 261 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 SEZ6L2Q6UXD5 910 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 IER2Q9BTL4 223 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 TOX4O94842 621 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 TMEM37Q8WXS4 190 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 PAPPAQ13219 1627 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 NCBP2LA6PVI3 153 aaKnown RBP12.35□□□□□ -0.43
PRKCB-201ENST00000303531 HSBP1O75506 76 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 LYZL6O75951 148 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 RBP4P02753 201 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 HOXC8P31273 242 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 OPRK1P41145 380 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 GALR1P47211 349 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 RHBDD2Q6NTF9 364 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 HES7Q9BYE0 225 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 PRR13Q9NZ81 148 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 ATG2BQ96BY7 2078 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 INHBBP09529 407 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 PMCHP20382 165 aa12.35□□□□□ -0.43
PRKCB-201ENST00000303531 MPLP40238 635 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
PRKCB-201ENST00000303531 EIF3IQ13347 325 aaKnown RBP12.34□□□□□ -0.43
PRKCB-201ENST00000303531 SIGIRRQ6IA17 410 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 ACSM6Q6P461 480 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 ONECUT1Q9UBC0 465 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 HRKO00198 91 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 OIT3Q8WWZ8 545 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 KLK10O43240 276 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 FAM24BQ8N5W8 94 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 LSMEM1Q8N8F7 131 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 LRRC29Q8WV35 223 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 CD200P41217 278 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 RPS4XP62701 263 aaKnown RBP12.34□□□□□ -0.43
PRKCB-201ENST00000303531 TMEM241Q24JQ0 296 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 NUBPLQ8TB37 319 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 MISP3Q96FF7 219 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 MYOZ1Q9NP98 299 aaPredicted RBP12.34□□□□□ -0.43
PRKCB-201ENST00000303531 TMEM33P57088 247 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 OR2I1PQ8NGU4 316 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 CLDN34H7C241 214 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 ZNF737O75373 536 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 WDR13Q9H1Z4 485 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 ZMIZ1Q9ULJ6 1067 aa12.34□□□□□ -0.43
PRKCB-201ENST00000303531 A0A1W2PQD3 144 aa12.33□□□□□ -0.43
PRKCB-201ENST00000303531 CXCL3P19876 107 aa12.33□□□□□ -0.43
PRKCB-201ENST00000303531 ZAR1Q86SH2 424 aa12.33□□□□□ -0.43
PRKCB-201ENST00000303531 MYPOPQ86VE0 399 aaPredicted RBP12.33□□□□□ -0.43
PRKCB-201ENST00000303531 KLHDC1Q8N7A1 406 aa12.33□□□□□ -0.43
PRKCB-201ENST00000303531 SLC25A22Q9H936 323 aa12.33□□□□□ -0.43
PRKCB-201ENST00000303531 RGS13O14921 159 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 SNRPEP62304 92 aaKnown RBP12.33□□□□□ -0.44
PRKCB-201ENST00000303531 PAX5Q02548 391 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 MRGPRDQ8TDS7 321 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 LAMB2P55268 1798 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 LOC102723971A0A1B0GUV8 181 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 A0A1W2PPV9 198 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 LIPT2A6NK58 231 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 VAMP3Q15836 100 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 SOCS1O15524 211 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 TRAT1Q6PIZ9 186 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 OR10D4PQ8NGN7 298 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 FGF2P09038 288 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 FAHD2BQ6P2I3 314 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms